3,911 Klebsiella Isolates with Genomic Metadata and Locus Assignments

3,911 Klebsiella sp. isolates are described in this metadata table. It includes genome and assembly identifiers, collection source, species, sequence type, and K- and O-locus assignments with confidence metrics. The dataset was authored by Aleksandra Otwinowska and last updated on April 28, 2026.

Use Cases

• Conducting genome-wide association studies (GWAS) based on the GWAS inclusion flag mentioned in the description
• Analyzing the distribution of K- and O-locus serotypes based on the locus assignments with confidence metrics
• Studying the correlation between collection source and sequence type (ST) for epidemiological investigations
• Evaluating assembly quality for genomic studies based on the included assembly statistics

Strengths

• Includes metadata for 3,911 distinct bacterial isolates
• Provides K- and O-locus assignments with associated confidence metrics
• Contains a flag indicating suitability for genome-wide association studies (GWAS)

Limitations

• Column-level documentation is absent; field semantics must be inferred after download
• Row count is unknown, which may limit suitability assessment
• The dataset is small at 949.2 KB, indicating limited scope

Provenance

Source

figshare

Freshness

Last updated 2026-04-28 17:23:34; freshness should be verified