Motif Enrichment Summary for Streptomyces clavuligerus BldD Overexpression Transcriptomics

Transcriptomic data from a 2026 study comparing a Streptomyces clavuligerus strain overexpressing the bldD regulator with a control during fermentation. The dataset, shared by author Luisa F. Patiño, likely contains motif enrichment results from analyses performed at 24 and 72 hours. It is licensed for reuse under CC-BY-4.0.

Use Cases

• Identifying transcription factor binding motifs based on transcriptomic changes from BldD overexpression.
• Analyzing shifts in metabolic pathway gene expression, such as β-lactam and terpene biosynthesis.
• Studying the link between morphological development genes (e.g., bldN, bldM) and global regulators.
• Comparing regulatory mechanisms in Streptomyces clavuligerus with the model organism Streptomyces coelicolor.

Strengths

• Data is derived from a controlled transcriptomic experiment with defined time points (24h and 72h).
• License is clearly defined as CC-BY-4.0, permitting open reuse.
• Last update timestamp is precise (2026-04 22 17:27:51), indicating recent availability.

Limitations

• Dataset size is extremely small (336.0 B), suggesting it is a summary file, not raw transcriptomic data.
• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment for statistical analysis.

Provenance

Source

figshare, author Luisa F. Patiño

Collection Method

Likely derived from transcriptomic analyses (e.g., RNA-seq) of engineered and control bacterial strains during fermentation.

Time Range

Experimental time points at 24 and 72 hours of fermentation.

Freshness

Last updated 2026-04-22 17:27:51; freshness should be verified.

Geography

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