MPRAmatch Barcode-Oligo Association Output

Output from the MPRAmatch pipeline for creating associations between DNA barcodes and oligo sequences. The data is provided in a 35.7 MB XLSX file, authored by Maddy Comerford and last updated in March 2026.

Use Cases

• Map barcode sequences to their associated oligo sequences for downstream genomic analysis.
• Validate the output of the MPRAmatch pipeline by examining the generated barcode-oligo pairs.
• Use the provided associations as a reference for analyzing barcode sequencing data from MPRA experiments.

Strengths

• Data is shared under a permissive CC BY 4.0 license.
• File is a manageable 35.7 MB in size for download and local processing.
• Dataset was updated in March 2026, indicating recent maintenance.

Limitations

• The number of rows and specific column structure are unknown, limiting assessment of scale and features.
• Data is provided only in a single XLSX file format, which may not be ideal for programmatic access at scale.
• Lack of sample data or column descriptions makes it difficult to evaluate data structure and quality prior to download.

Provenance

Source

figshare

Collection Method

Output of the MPRAmatch pipeline.

Freshness

Last updated on 2026-03-24.