RNA-seq Data for Parasitic Nematodes A. ceylanicum and H. contortus

Published RNA-seq files for the parasitic nematodes Ancylostoma ceylanicum and Haemonchus contortus, sourced from the European Nucleotide Archive. The 12.1 KB Excel table, authored by Erich M. Schwarz and last updated in March 2026, provides metadata linking sample accessions to biological conditions like sex, developmental stage, and tissue. It serves as a reference for supplementary gene expression analyses in a related parasitology study.

Use Cases

• Cross-reference RNA-seq sample metadata with gene expression analyses based on the linked supplementary tables.
• Study differential gene expression in parasitic nematodes based on biological conditions like sex and developmental stage.
• Re-analyze raw sequencing data from the European Nucleotide Archive using the provided SRA accession numbers.

Strengths

• Provides direct ENA accession numbers and URLs for each RNA-seq file, enabling data verification and re-analysis.
• Includes detailed biological condition metadata such as sex, developmental stage, tissue, and replicate number.
• Released under a permissive CC-BY-4.0 license, allowing broad reuse.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The dataset is very small at 12.1 KB, indicating it is a metadata index rather than containing sequence data itself.

Provenance

Source

European Nucleotide Archive (ENA)

Collection Method

Files were downloaded from ENA and compiled into a metadata table.

Time Range

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Freshness

Last updated 2026-03-17 17:34:40; freshness should be verified.

Geography

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