Leptospira PubMLST Reference Isolates for Phylogenetic Tree Construction

Erni Juwita Nelwan provides reference isolates from the Leptospira PubMLST database. The dataset includes sequence types (STs) and allele profiles based on MLST scheme 3, used for constructing phylogenetic trees. It was last updated on May 13, 2026.

Use Cases

• Constructing phylogenetic trees based on the provided reference isolates.
• Analyzing bacterial population structure based on sequence types (STs).
• Comparing allele profiles for epidemiological studies based on the MLST scheme.

Strengths

• Data is sourced from the authoritative PubMLST database.
• The dataset is small at 16.3 KB, facilitating quick download and inspection.
• It is licensed under CC-BY-4.0, allowing for broad reuse.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

Leptospira PubMLST database

Freshness

Last updated 2026-05-13 17:47:21.