DEGs and Panther GO Analysis of Pseudobulk Sox9+ Retinal Cells

A 960.9 KB Excel file containing differential expression and Panther GO analysis results for pseudobulk Sox9+ cells from postnatal mouse retina. The dataset was created by author Yacine Touahri and last updated on March 18, 2026. All Sox9-expressing cells were combined for the analysis, regardless of their original cluster assignment.

Use Cases

• Identify differentially expressed genes (DEGs) based on the combined Sox9+ cell population.
• Perform functional enrichment analysis using the Panther GO results.
• Investigate gene expression programs related to Müller glia transition and cell cycle exit.
• Validate findings on the role of Sox9 in postnatal retinal progenitor cells.

Strengths

• Data is openly available under a CC-BY-4.0 license.
• File size of 960.9 KB suggests a focused, manageable dataset for analysis.
• Analysis is specifically focused on Sox9+ cells, a key cell type in retinal development.

Limitations

• Row count and column definitions are unknown, requiring manual inspection after download.
• Description metadata is limited; actual data quality requires manual inspection after download.
• The dataset's scope is limited to a specific cell population (Sox9+) from a postnatal developmental stage.

Provenance

Source

figshare, author Yacine Touahri

Collection Method

Analysis of pseudobulk RNA-seq data from Sox9+ retinal cells.

Time Range

Postnatal Day 7 mouse retina (inferred from platform tags).

Freshness

Last updated 2026-03-18 17:42:50; freshness should be verified.