Stuart D. Blacksell published a dataset on figshare detailing single-gene diversity of Orientia tsutsugamushi. The data likely contains genetic sequences for the 56-kDa TSA and 47-kDa htrA genes from samples collected in Thailand, Vietnam, and Laos. The dataset is 9.5 KB in size and was last updated on May 26, 2026.
Use Cases
- Analyze genetic diversity of O. tsutsugamushi based on the 56-kDa TSA gene sequences mentioned in the description
- Compare strain variations across Southeast Asian countries based on the geographic coverage of Thailand, Vietnam, and Laos
- Investigate potential correlations between gene variants and scrub typhus clinical outcomes based on the pathogen focus
Strengths
- Dataset is openly licensed under CC-BY-4.0
- Data is focused on a specific pathogen (Orientia tsutsugamushi) and two key genes
- Geographic coverage includes three Southeast Asian countries
Limitations
- Row count is unknown, which may limit suitability assessment
- Column-level documentation is absent; field semantics must be inferred after download
- The dataset is very small (9.5 KB), indicating limited scope
Provenance
- Source
- figshare
- Freshness
- Last updated 2026-05-26 17:29:13; freshness should be verified
- Geography
- Thailand, Vietnam, Laos