Tool Versions and Command-Line Arguments for Genomic Experiments

10.3 KB Excel file records the specific software versions and command-line arguments used in genomic assembly experiments. Parham Kazemi published this metadata on figshare in May 2026 under a CC-BY-4.0 license. The description indicates placeholder paths for assemblies, reads, and databases, suggesting it documents a reproducible computational workflow.

Use Cases

• Replicating genome assembly experiments based on recorded tool versions and arguments.
• Auditing computational reproducibility for genomics research based on documented command-line parameters.
• Benchmarking software performance across different versions based on the experimental metadata.
• Creating standardized workflow documentation for bioinformatics labs based on the structured parameter log.

Strengths

• File size is precisely 10.3 KB, indicating a compact and focused metadata record.
• License is clearly specified as CC-BY-4.0, permitting broad reuse with attribution.
• Last update timestamp is precise: 2026-05 06 17:39:44.

Limitations

• Row count is unknown, which may limit suitability assessment for statistical tasks.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare, author Parham Kazemi.

Collection Method

Likely manually compiled from experimental logs.

Time Range

null

Freshness

Last updated 2026-05-06 17:39:44; freshness should be verified.

Geography

null