TPM Values for Oilseed Rape SUC Genes from P. brassicae-Infected Roots

Transcripts per million (TPM) values quantify expression levels of SUC genes in oilseed rape roots infected with the pathogen Plasmodiophora brassicae. The 11.3 KB dataset was contributed by Jiaqi Liu and last updated on May 5, 2026. It is shared under a CC-BY-4.0 license on the figshare platform.

Use Cases

• Identify differentially expressed SUC genes based on TPM values from infected versus healthy root samples.
• Analyze the role of sucrose transporter genes in plant-pathogen interactions described in the transcriptome study.
• Validate or compare transcriptome sequencing results for specific gene families in oilseed rape.
• Integrate TPM expression data with other omics datasets for systems biology modeling of plant defense.

Strengths

• Data is openly shared under a permissive CC-BY-4.0 license.
• The dataset is focused on a specific gene family (SUC) and a well-defined biological condition (P. brassicae infection).
• File size of 11.3 KB indicates a compact, likely focused dataset.

Limitations

• Row count and specific column definitions are unknown, limiting pre-download assessment of data structure.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare

Collection Method

Derived from transcriptome sequencing of P. brassicae-infected oilseed rape roots.

Freshness

Last updated 2026-05-05 17:39:13; freshness should be verified.