Actinomadura Welshii Genome Reassembly from Public Data

A 7.8 MB FASTA file containing a reassembled genome for the bacterium Actinomadura welshii. The reassembly was generated by Andrew Keith Watson from publicly available data in BioProject PRJNA1232214 to address contamination in a prior published assembly. The dataset was last updated on May 28, 2026.

Use Cases

• Comparative genomics analysis based on the reassembled Actinomadura welshii genome.
• Taxonomic classification and phylogenetic studies based on the corrected genome sequence.
• Reference-based mapping for sequencing reads based on the provided FASTA file.
• Investigating genome contamination in public databases based on the described reassembly motivation.

Strengths

• Dataset is 7.8 MB in size, indicating a focused and manageable genomic sequence.
• Uses the CC-BY-4.0 license, permitting broad reuse with attribution.
• Addresses a specific issue of genome contamination mentioned in the description.

Limitations

• Row count and column-level metadata are unknown, which may limit suitability assessment.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

Publicly available data from BioProject PRJNA1232214, hosted on figshare.

Collection Method

Reassembly of genomic data, likely using bioinformatics tools, to correct for contamination.

Freshness

Last updated 2026-05-28 13:00:19; freshness should be verified.