Phage-Plasmid-Like Elements: Benchmarking and Functional Trait Metadata

Benchmarking and training data for phage-plasmid-like elements (PPLEs) collected by James I. Mullet. The 537.4 KB Excel file contains associated metadata for PPLEs found across diverse environments. It was last updated on May 29, 2026.

Use Cases

• Benchmarking PPLE detection tools based on the provided metadata.
• Training machine learning models to predict PPLE functional traits from genomic context.
• Analyzing the distribution of niche-specific functional traits across different environments.
• Studying the genomic characteristics that distinguish phage-plasmid-like elements.

Strengths

• Data is openly licensed under CC-BY-4.0.
• File size of 537.4 KB indicates a focused, manageable dataset.
• Metadata includes a last update timestamp of 2026-05-29.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The description is minimal, providing little detail on data collection methodology.

Provenance

Source

James I. Mullet via figshare.

Collection Method

Likely derived from genomic analysis of environmental samples.

Freshness

Last updated 2026-05-29 17:36:56.