Small Secreted Effectors: Amino Acid Sequences for a Smut Fungus

A 10.5 KB text file containing computationally predicted amino acid sequences of secreted proteins from the smut fungus Microbotryum intermedium. The dataset was created by Michael Perlin using a pipeline of bioinformatics tools and was last updated on 2026-04-24. It is shared under a CC-BY-4.0 license.

Use Cases

• Training or benchmarking protein secretion prediction models based on the described computational pipeline.
• Studying the evolution of fungal virulence factors based on the predicted secretome.
• Identifying candidate effector proteins for experimental validation in plant-fungal interactions.

Strengths

• Dataset is small (10.5 KB), facilitating quick download and inspection.
• Data is derived from a specific, named organism (Microbotryum intermedium), providing a clear biological context.
• The computational prediction pipeline was applied stringently, as described.

Limitations

• Row count and column-level documentation are unknown; field semantics must be inferred after download.
• The dataset is very small in size, indicating a limited scope focused on a single organism's predicted secretome.

Provenance

Source

figshare

Collection Method

Computational prediction using a pipeline of bioinformatics tools on the genome of Microbotryum intermedium.

Time Range

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Freshness

Last updated 2026-04-24 16:11:20; freshness should be verified.

Geography

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