SNP Variants from Whole-Genome Resequencing of 81 Solen grandis Individuals from China

SNP variants identified from whole-genome resequencing of Solen grandis populations collected from three geographic regions in China. A total of 81 individuals were sequenced, and SNP calling was performed using standard bioinformatics pipelines. The dataset was authored by Yatong Yao and last updated on 2026-04-30.

Use Cases

• Analyze population structure based on SNP variants from three geographic regions
• Estimate genetic diversity metrics based on filtered SNP data
• Perform selection scans to identify loci under adaptation
• Investigate genetic differentiation between Solen grandis populations

Strengths

• Contains SNP data from 81 sequenced individuals
• Variants were filtered based on quality, missing rate, and minor allele frequency thresholds
• Dataset is 1.7 GB in size, suggesting substantial genetic information
• Released under a permissive CC-BY-4.0 license

Limitations

• Column-level documentation is absent; field semantics must be inferred after download
• Row count is unknown, which may limit suitability assessment
• Data may reflect geographic bias inherent to the three sampled regions in China

Provenance

Source

figshare, author Yatong Yao

Collection Method

Whole-genome resequencing and SNP calling using standard bioinformatics pipelines

Time Range

null

Freshness

Last updated 2026-04-30 13:28:40; freshness should be verified

Geography

Three geographic regions in China