Spatial transcriptomic profiling of potato tissues from three sample types: stolon at S1 stage, stolon at S2 stage, and stem tissues. The dataset includes multiple biological replicates for each condition and was created by Jinye Li, last updated on May 5, 2026. Comparative analyses investigate differences between developmental stages and tissue types to characterize spatial gene expression patterns during early tuber organogenesis.
Use Cases
- Identify differentially expressed genes between elongating (S1) and swelling (S2) stolon stages based on the described developmental comparison.
- Characterize spatial gene expression patterns during early tuber organogenesis based on the spatial transcriptomic profiling mentioned.
- Compare gene expression profiles between stolon and stem tissue types as described in the dataset's comparative analysis.
- Validate molecular markers for potato tuber initiation based on the stage-specific tissue samples.
Strengths
- Includes multiple biological replicates for each of the three described sample conditions.
- Comparative analysis is designed to investigate both developmental stages (S1 vs S2) and tissue types (stolon vs stem).
- Released under a permissive CC-BY-4.0 license.
Limitations
- Column-level documentation is absent; field semantics must be inferred after download.
- Row count is unknown, which may limit suitability assessment.
- Description metadata is limited; actual data quality requires manual inspection after download.
Provenance
- Source
- figshare
- Collection Method
- Spatial transcriptomic profiling performed on potato tissues.
- Freshness
- Last updated 2026-05-05 06:52:43; freshness should be verified