Sequenoscope: Nanopore Adaptive Sequencing Data for ZymoBIOMICS Mock Communities

Supplementary data for the Sequenoscope manuscript includes 30 tables and 18 figures detailing adaptive sampling outcomes. The 845.0 MB dataset contains a sequencing summary file from MinKNOW and Guppy basecalling of ZymoBIOMICS Microbial Community DNA Standards. Author Abdallah Meknas published the dataset on figshare under a CC-BY-4.0 license, last updated on 2026-05-01.

Use Cases

• Benchmarking adaptive sampling performance based on read termination reasons in the sequencing summary file
• Analyzing read length and quality distributions across control and test conditions mentioned in the description
• Comparing coverage and abundance in defined mock metagenomic communities
• Reproducing technical replicate summaries generated by the Sequenoscope analyze and plot modules

Strengths

• Includes 30 supplementary tables (S1-S30) and 18 supplementary figures (S1-S18) providing expanded methodological context
• Sequencing summary file contains the critical 'end_reason' column for inferring per-read adaptive sampling outcomes
• Data is based on defined ZymoBIOMICS Microbial Community DNA Standards (Even and Log communities), supporting reproducible evaluation

Limitations

• Column-level documentation is absent; field semantics must be inferred after download
• Row count is unknown, which may limit suitability assessment
• Description metadata is limited; actual data quality requires manual inspection after download

Provenance

Source

figshare

Collection Method

Produced during basecalling from POD5 raw signal data by MinKNOW and Guppy, then processed by the Sequenoscope tool.

Freshness

Last updated 2026-05-01 11:48:59; freshness should be verified