Common Bean Genomics: Supplementary Data for Iron, Zinc, and Yield GWAS

Supplementary data files from a 2026 figshare submission support genetic analyses of 427 common bean genotypes. The files contain phenotypic summaries, association mapping outputs, candidate gene annotations, and genomic prediction metrics. Author Winnyfred Amongi published the data under a CC0-1.0 license.

Use Cases

• Conducting genomic selection analyses based on the provided prediction performance metrics (PCC, MAE, CICE).
• Prioritizing candidate genes for agronomic traits based on functional annotations and gene ontology terms.
• Validating quantitative trait nucleotide (QTN) discoveries using the reported chromosomal locations, allelic effects, and LOD scores.
• Reproducing phenotypic analyses using the Best Linear Unbiased Predictors (BLUPs) and Estimates (BLUEs) for each genotype.

Strengths

• Data supports analyses for 427 distinct common bean genotypes.
• Includes five distinct supplementary tables covering phenotypic summaries, ANOVA, QTN discovery, gene annotation, and prediction metrics.
• Candidate gene annotation includes pathway descriptions and gene ontology terms for multiple traits.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• File size is listed as 0.0 B, indicating the scale is limited or metadata may be incomplete.

Provenance

Source

figshare

Collection Method

Likely generated from genetic and genomic analyses of a common bean panel.

Time Range

Publication date is 2026; specific study period is not stated.

Freshness

Last updated 2026-03-22 06:40:35.

Geography

Geographic origin of the 427 bean genotypes is not specified.