Hox Gene Sequences and Assemblies for Caprellid Crustaceans

44.5 MB of supplementary data for a study on Hox gene expression in caprellids. The dataset includes homeodomain sequences for phylogenetic analysis and two de novo assemblies generated with Trinity software versions r20140707 and 2.8.4. It was authored by Mizuki Kajino and last updated on May 13, 2026.

Use Cases

• Conduct phylogenetic analysis based on homeodomain sequences.
• Perform comparative genomics using the provided de novo assemblies.
• Study gene expression patterns related to limb and segment loss in crustaceans.
• Benchmark or compare results from different versions of the Trinity assembly software.

Strengths

• Data is directly supplementary to a published scientific paper, providing context.
• Includes two distinct de novo assemblies generated with different software versions for comparison.
• Released under a permissive CC-BY-4.0 license for reuse.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• The 44.5 MB size suggests a relatively small-scale genomic dataset.

Provenance

Source

figshare

Collection Method

De novo assembly generated using Trinity software.

Freshness

Last updated 2026-05-13 04:45:55; freshness should be verified.