Micrococcus Luteus Genomic Attributes for 12 Strains

Ashutosh Kabiraj's supplementary genomic analysis data includes 100 contamination-free Micrococcus luteus genomes retrieved from NCBI. The dataset focuses on 12 strains from six isolation sources, detailing genome sizes from 2.4 to 2.8 Mb, functional annotations, and resistance genes. It was last updated on 2026-05-07.

Use Cases

• Analyzing niche-specific adaptation based on ANI values and isolation sources mentioned in the description
• Identifying plant-growth-promoting traits based on tryptophan biosynthesizing genes and aes family proteins
• Studying heavy-metal resistance based on arsenic (arsC, arsB), mercury (merA, merB, merR), and copper (copZ, copD) genes
• Investigating genomic plasticity based on accessory genomic attributes like genomic islands, prophages, and insertion sequences

Strengths

• Includes 100 contamination-free genomes from a trusted source (NCBI)
• Focuses on 12 strains from six distinct isolation sources for comparative analysis
• Provides functional annotation results including 15,444 KEGG orthologs and 6,022 Pfam domains

Limitations

• Column-level documentation is absent; field semantics must be inferred after download
• Row count is unknown, which may limit suitability assessment
• The dataset is small (67.7 KB), suggesting limited scope or summary-level data

Provenance

Source

National Center for Biotechnology Information (NCBI)

Collection Method

Genomes retrieved and analyzed using in silico comparative genomic analysis tools (Prokka, IslandViewer 4, PHASTER)

Freshness

Last updated 2026-05-07 01:41:06; freshness should be verified