Table 1_Analysis of biosynthetic genes of phenolamides in Ricinus communis L. based on met

An integrated metabolomic and transcriptomic study investigated phenolamide biosynthesis in Ricinus communis L. across root, stem, and leaf tissues at three time points. The analysis identified N-feruloyl putrescine as the predominant phenolamide, with peak accumulation in roots at 06:00, and characterized two novel BAHD hydroxycinnamoyl transferases, RcHCT1 and RcHCT2. Author Hua Li published the dataset under a CC-BY-4.0 license on figshare in 2026.

Use Cases

• Modeling phenolamide biosynthetic pathways based on integrated metabolomic and transcriptomic data.
• Comparing enzyme substrate specificity based on the characterization of RcHCT1 and RcHCT2.
• Analyzing spatiotemporal metabolite accumulation patterns based on tissue and time-point sampling.
• Conducting molecular docking studies based on the described active pockets of RcHCT1 and RcHCT2.

Strengths

• Integrated multi-omics data from metabolomics and transcriptomics.
• Includes data from three distinct plant tissues (root, stem, leaf) and three time points (06:00, 12:00, 18:00).
• Results validated by in vitro enzymatic assays.

Limitations

• Dataset is small at 78.5 KB, indicating limited scope.
• Row count and column-level documentation are unknown, requiring manual inspection after download.

Provenance

Source

figshare

Collection Method

Integrated metabolomic and transcriptomic study with subsequent in vitro enzymatic assays.

Freshness

Last updated 2026-05-25 06:03:33.

Geography

Plant likely studied in a tropical region, but specific location is unknown.