Passiflora edulis Mitochondrial Genome Sequencing Data

Two circular mitochondrial chromosomes totaling 715,005 base pairs for the Passiflora edulis 'GH-1' variety. The dataset, authored by Yao Teng and last updated in May 2026, includes annotations for 50 functional genes, 21 tRNAs, and identifies 1,596 transposable elements and nine mitochondrial plastid DNA fragments.

Use Cases

• Comparative genomic analysis based on the identified gene rearrangements between purple and yellow Passiflora edulis varieties.
• Phylogenetic studies based on the complete, high-quality mitochondrial genome assembly.
• Analysis of inter-organellar gene transfer based on the identified mitochondrial plastid DNA (MTPT) fragments.
• Study of repeat-mediated genome conformation based on the 56 long forward repeats and 59 simple sequence repeats (SSRs).

Strengths

• Complete mitochondrial genome assembly validated by PCR and Sanger sequencing.
• Hybrid sequencing strategy combining PacBio HiFi long reads and Illumina short reads.
• Dataset includes specific quantitative findings: 715,005 total base pairs, 50 genes, 1,596 transposable elements.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The dataset is very small (11.3 KB), indicating limited scope, likely a summary table.

Provenance

Source

figshare

Collection Method

Hybrid sequencing (PacBio HiFi and Illumina) assembly, validated by PCR and Sanger sequencing.

Freshness

Last updated 2026-05-28 14:02:20; freshness should be verified.