Table 1_Genome-wide analysis of the EIN3/EIL family in rye and functional identification o

Seven ScEIL genes were identified from the rye reference genome, with ScEIL5 showing a 4.8-fold expression increase after stripe rust infection. The dataset, created by Yarong Wang and last updated in March 2026, contains results from genome-wide identification, expression profiling, and functional validation via VIGS-mediated silencing. It provides data on gene structure, collinearity, cis-elements, and tissue-specific expression under biotic and abiotic stresses.

Use Cases

• Comparative genomics analysis based on collinearity data between monocot and dicot EIN3/EIL families.
• Identifying stress-responsive gene candidates based on cis-element predictions and expression profiles under various conditions.
• Studying negative regulators of disease resistance based on the functional identification of ScEIL5 via VIGS silencing.
• Analyzing gene structure and evolutionary divergence within the EIN3/EIL transcription factor family.

Strengths

• Identifies seven specific ScEIL genes (ScEIL1–ScEIL7) from the rye reference genome.
• Includes quantitative expression data, such as a 4.8-fold increase for ScEIL5 post-inoculation.
• Functional validation is provided via VIGS-mediated gene silencing experiments.

Limitations

• Row count and column-level documentation are absent, requiring manual inspection after download.
• The dataset is very small at 9.9 KB, indicating limited scope and likely summary-level results.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

figshare, author Yarong Wang.

Collection Method

Genome-wide identification from the rye reference genome, followed by bioinformatic analysis and experimental validation (VIGS, expression profiling).

Freshness

Last updated 2026-03-19 06:50:17; freshness should be verified.