Hemerocallis SSR Marker Data for Molecular Breeding

Feifan Hou's 2026 study provides genomic data for Hemerocallis breeding, including 913,004 identified SSR loci. It details two marker sets used for genetic diversity analysis of 287 germplasms and linkage map construction with 90 markers across 11 linkage groups.

Use Cases

• Analyze genetic diversity across 287 Hemerocallis germplasms using polymorphic SSR markers and PIC values.
• Construct a genetic linkage map from 90 parent-progeny polymorphic SSR markers distributed across 11 linkage groups.
• Identify quantitative trait loci (QTLs) for petal color traits using marker and phenotypic variation data.
• Validate SSR marker polymorphism by testing amplification products and polymorphism rates across germplasm accessions.

Strengths

• Dataset is derived from genome-wide analysis identifying 913,004 SSR loci.
• Includes results from validating markers across 287 Hemerocallis germplasm accessions.
• Provides a constructed genetic map with 90 markers spanning 3051.49 cM.

Limitations

• Dataset scope is limited, reflected in its small 189.0 KB file size.
• Data format is a single Excel file; structure and specific columns are not described.
• Temporal and geographic coverage of the germplasm samples is not specified.

Provenance

Source

Feifan Hou via figshare.

Collection Method

Genome-wide SSR marker development and application in molecular breeding, based on the Hemerocallis 'Meng Zi Hua' genome.

Time Range

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Freshness

Last updated March 2026.

Geography

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