Stenotrophomonas Maltophilia 3A Metabolomic and Genomic Data for Biocontrol Research

Pramod Kumar Sahu published metabolomic and genomic data for the endophytic bacterium Stenotrophomonas maltophilia strain 3A on May 12, 2026. The dataset includes results from FTIR and LC-MS/MS analysis revealing a diverse array of metabolites, alongside whole genome analysis identifying five biosynthetic gene clusters. This data supports research into the strain's mechanisms for biocontrol against the plant pathogen Ralstonia solanacearum.

Use Cases

• Identify potential biocontrol compounds based on LC-MS/MS metabolite profiling.
• Analyze biosynthetic gene clusters for secondary metabolite production based on antiSMASH analysis.
• Study endophyte colonization patterns in plant tissues based on confocal laser scanning microscopy results.
• Investigate metabolic pathways like glycerophospholipid or diterpenoid biosynthesis based on KEGG enrichment analysis.

Strengths

• Data integrates multi-omics results from metabolomics (FTIR, LC-MS/MS) and genomics (whole genome analysis).
• Analysis confirmed five biosynthetic gene clusters responsible for bioactive peptide production.
• Confocal microscopy validated effective colonization of tomato root and stem tissues.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• The dataset is small (132.7 KB), indicating limited scope.

Provenance

Source

figshare

Collection Method

Multi-omics approach including FTIR, LC-MS/MS metabolomics, whole genome sequencing, and antiSMASH analysis.

Freshness

Last updated 2026-05-12 05:42:36; freshness should be verified.