Genomic and Phenotypic Data for a Fatal Macrococcus caseolyticus Bloodstream Infection

A 26.2 KB document details the genomic and phenotypic analysis of a fatal human bloodstream infection caused by Macrococcus caseolyticus subsp. caseolyticus in China. The data includes whole-genome sequencing results from the Illumina HiSeq platform and phenotypic tests for antimicrobial susceptibility and biofilm formation. The dataset was authored by Lifeng Shi and last updated on June 1, 2026.

Use Cases

• Studying virulence gene homologs (e.g., bopD, ami, srtE, pfbA) associated with biofilm formation and host colonization.
• Analyzing antimicrobial resistance mechanisms based on identified homologs like vgaB, macB, and sdrM.
• Comparing biofilm-forming capacity of clinical isolates against reference strains like Staphylococcus aureus ATCC 29213.
• Investigating the genomic basis for host adaptation and persistence in opportunistic pathogens.

Strengths

• Includes whole-genome sequencing data from the Illumina HiSeq platform.
• Phenotypic testing covers antimicrobial susceptibility and quantitative biofilm-forming capacity.
• Provides a detailed clinical context for a rare, fatal human infection.

Limitations

• The dataset is a 26.2 KB DOCX file, which suggests limited raw data scope.
• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.

Provenance

Source

figshare

Collection Method

Whole-genome sequencing and phenotypic testing of a clinical isolate from a patient blood culture.

Freshness

Last updated 2026-06-01 04:18:04; freshness should be verified.

Geography

China