Table 3_Genomic characterization of vancomycin-resistant Enterococcus faecium and van-carr

A hospital in northeastern China collected 19 vancomycin-resistant Enterococcus faecium isolates between 2019 and 2024. The dataset includes genomic analysis results such as sequence types, plasmid groups, and transposon variants. The data was published by Han Yao on figshare under a CC-BY-4.0 license.

Use Cases

• Tracking temporal shifts in bacterial sequence types based on the reported ST17, ST68, and ST78 distributions.
• Analyzing plasmid diversity and fragmentation events based on the 19 identified plasmid groups.
• Studying structural variations in resistance transposons based on the described Tn1546 variants.
• Correlating van gene types (vanA, vanM) with specific plasmid or clonal backgrounds.

Strengths

• Includes 19 isolates with whole-genome sequencing data.
• Covers a 5-year sampling period (2019-2024) from a single hospital.
• Provides analysis of five sequence types and 19 plasmid groups.

Limitations

• Row count and column-level documentation are unknown.
• The dataset is very small at 12.1 KB, indicating limited scope.
• Data may reflect geographic and institutional bias specific to one hospital in China.

Provenance

Source

figshare

Collection Method

Whole-genome sequencing and bioinformatic analysis of bacterial isolates.

Time Range

2019-2024

Freshness

Last updated 2026-04-10 05:59:19; freshness should be verified.

Geography

First Hospital of Jilin University, northeastern China