Rice Nitrogen Uptake Enhancement Data by Endophytic Bacterium RS1

Transcriptomic, metabolic, and field experiment data investigate how the endophytic bacterium Burkholderia vietnamiensis RS1 promotes nitrate uptake and assimilation in rice. The dataset includes results from 15N-labeled ammonium nitrate experiments, LC-MS/MS metabolic analysis, RT-qPCR gene expression, and field trials comparing nitrate- and urea-based fertilization. Author Rina Shinko published the data on figshare under a CC-BY-4.0 license in May 2026.

Use Cases

• Modeling plant-microbe interactions based on transcriptomic and metabolic changes described in the study
• Evaluating bioinoculant efficacy for sustainable agriculture under different fertilization regimes
• Analyzing the link between nitrate transport gene expression and amino acid assimilation pathways
• Comparing plant growth promotion between nitrate-based and urea-based fertilization systems

Strengths

• Data integrates multiple experimental methods: 15N-labeling, LC-MS/MS, RT-qPCR, and field trials.
• The study design includes a control condition comparing nitrate and urea fertilization.
• Dataset is openly shared under a CC-BY-4.0 license.

Limitations

• The dataset is small (657.6 KB), suggesting limited scope or summary-level data.
• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.

Provenance

Source

figshare

Collection Method

Data likely originates from controlled laboratory and field experiments described in the associated research.

Freshness

Last updated 2026-05-12 05:27:25