Table 4_Genomic characterization of vancomycin-resistant Enterococcus faecium and van-carr

Han Yao's dataset contains genomic analysis results for 19 vancomycin-resistant Enterococcus faecium (VREfm) isolates collected from the First Hospital of Jilin University between 2019 and 2024. The data includes sequence types, plasmid groups, and transposon structures associated with vanA and vanM resistance genes. It was last updated on figshare in April 2026.

Use Cases

• Analyzing the temporal distribution of sequence types (ST17, ST68, ST78, ST80, ST547) based on collection years.
• Investigating plasmid diversity and fragmentation events based on the 19 identified plasmid groups.
• Studying structural variations in Tn1546 transposons based on reported insertions, deletions, and rearrangements.
• Correlating van gene types (vanA, vanM) with specific plasmid and clonal backgrounds.

Strengths

• Data covers a 5-year sampling period from 2019 to 2024.
• Includes 19 distinct bacterial isolates with identified sequence types and resistance genes.
• Analysis includes plasmidome and transposon structural diversity.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The dataset is small at 28.7 KB, indicating limited scope.

Provenance

Source

figshare, author Han Yao.

Collection Method

Whole-genome sequencing and bioinformatic analysis (MLST, MOB-suite, FastANI, TnCentral) of clinical isolates.

Time Range

2019 to 2024

Freshness

Last updated 2026-04-10 05:59:18; freshness should be verified.

Geography

First Hospital of Jilin University, northeastern China