Table 8_Genomic characterization of vancomycin-resistant Enterococcus faecium and van-carr

19 vancomycin-resistant Enterococcus faecium (VREfm) isolates were collected from the First Hospital of Jilin University between 2019 and 2024. Whole-genome sequencing data provides genomic characterization, including sequence types, plasmid groups, and van gene-carrying mobile genetic elements. The dataset was authored by Han Yao and shared under a CC-BY-4.0 license.

Use Cases

• Analyzing the distribution of vanA and vanM resistance genes based on the genomic isolates.
• Tracking temporal shifts in sequence types (ST17, ST68, ST78, ST80, ST547) based on the collection years.
• Studying plasmid diversity and fragmentation events based on the 19 identified plasmid groups.
• Characterizing structural variations in Tn1546 transposon variants based on the transposon analysis.

Strengths

• Data covers a 5-year sampling period (2019-2024), allowing temporal trend analysis.
• Includes genomic analysis results for 19 distinct bacterial isolates.
• Analysis details multiple sequence types and plasmid groups, suggesting genetic diversity.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Dataset is very small (10.7 KB), indicating limited scope.

Provenance

Source

figshare, author Han Yao.

Collection Method

Whole-genome sequencing of 19 VREfm isolates collected from hospital departments.

Time Range

2019 to 2024

Freshness

Last updated 2026-04-10 05:59:24; freshness should be verified.

Geography

First Hospital of Jilin University, northeastern China.