21 Avian Pathogenic E. coli Genomes from Georgia Poultry Colibacillosis Cases

A table detailing 21 complete bacterial genomes from avian pathogenic Escherichia coli strains isolated from colibacillosis cases in Georgia poultry. The dataset includes metadata such as strain IDs, GenBank accession numbers, and assembly statistics. It was authored by Klao Runcharoon, Julia Ienes-Lima, and Catherine M. Logue and last updated on May 1, 2026.

Use Cases

• Comparative genomic analysis of avian pathogenic E. coli based on the listed genome assembly lengths and GC content.
• Tracking strain provenance and sequence data based on the provided Bioproject, Biosample, and SRA accession numbers.
• Studying plasmid diversity and antibiotic resistance potential based on the listed plasmid IDs and accession numbers.
• Benchmarking genome assembly quality based on metrics like the number of contigs and chromosome size.

Strengths

• Provides complete genomes for 21 distinct bacterial strains.
• Includes multiple accession identifiers (GenBank, Bioproject, Biosample, SRA) for data traceability.
• Contains detailed assembly metrics such as genome length, CDS count, and tRNA count.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The dataset is very small at 37.1 KB, indicating limited scope.

Provenance

Source

figshare, associated with a genome announcement publication.

Collection Method

Genomic sequencing and assembly of isolates from disease cases.

Time Range

null

Freshness

Last updated 2026-05-01 14:24:34; freshness should be verified.

Geography

Georgia (likely U.S. state), poultry sources.