Gene prediction and functional annotation for the genome of the fish species Terapon jarbua. Gene prediction was performed using BRAKER version 3.0.8, with transposable elements masked using TEsorter version 1.2.7. Functional annotation was conducted using EggNOG-mapper version 2.1.13 and InterProScan version 5.77-108.0.
Use Cases
- Comparative genomics based on annotated gene sequences.
- Functional gene analysis based on EggNOG and InterProScan annotations.
- Transposable element research based on masked genome features.
- Gene prediction algorithm benchmarking based on the BRAKER output.
Strengths
- Annotations generated using established bioinformatics tools (BRAKER 3.0.8, EggNOG-mapper 2.1.13, InterProScan 5.77-108.0).
- Data files are available in multiple formats (ANNO, AA, ANNOTATIONS, GTF).
- Dataset size is 281.6 MB, indicating substantial annotation content.
Limitations
- Column-level documentation is absent; field semantics must be inferred after download.
- Row count is unknown, which may limit suitability assessment.
- Description metadata is limited; actual data quality requires manual inspection after download.
Provenance
- Source
- figshare
- Collection Method
- Gene prediction and annotation performed computationally.
- Freshness
- Last updated 2026-06-01 02:56:23; freshness should be verified.