Complete Chloroplast Genome of Lophophora diffusa for Phylogenetic Analysis

A 115,689 base pair chloroplast genome sequenced using PacBio high-throughput technology. The genome encodes 100 unique genes and has a GC content of 36.52%. The dataset, authored by Teng Zhang and last updated in April 2026, provides a genomic resource for distinguishing psychoactive cacti species.

Use Cases

• Conducting phylogenetic analysis based on the resolved Lophophora clade.
• Developing forensic molecular tools based on the complete chloroplast genome sequence.
• Studying genome structure based on the described quadripartite organization with LSC, SSC, and IR regions.
• Comparing alkaloid-producing plant genetics based on the distinct profile mentioned for L. diffusa.

Strengths

• Complete genome sequence of 115,689 base pairs with precise structural measurements.
• Phylogenetic analysis robustly resolved the position of L. diffusa within a monophyletic clade.
• Dataset is openly licensed under CC-BY-4.0.

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Row count is unknown, which may limit suitability assessment.
• The dataset is small (2.7 MB), which may indicate limited scope beyond the core genome sequence.

Provenance

Source

figshare

Collection Method

PacBio high-throughput sequencing technology.

Time Range

Publication date circa 2026.

Freshness

Last updated 2026-04-24 07:23:09; freshness should be verified.

Geography

Plant species Lophophora diffusa.