VNTR Frequency Among Randomly Selected bTB Isolates from Great Britain

VNTR frequency data for 12 spoligotypes of bovine tuberculosis (bTB) from 5,387 randomly selected isolates in Great Britain. The dataset was produced by the Animal and Plant Health Agency (APHA) and is attributed to Crown Copyright in 2016. It likely contains tabular data on the prevalence of specific genetic markers across different bacterial strains.

Use Cases

• Analyze the genetic diversity of bovine tuberculosis strains based on VNTR frequency data.
• Compare the prevalence of different spoligotypes within the sampled bTB population.
• Model the population structure of Mycobacterium bovis based on the frequency of 12 spoligotypes.
• Support surveillance and control programs for bovine tuberculosis using genetic typing information.

Strengths

• Includes data from 5,387 randomly selected isolates, providing a substantial sample size.
• Focuses on 12 distinct spoligotypes, offering a structured view of genetic variation.
• Data originates from an authoritative government agency (APHA).

Limitations

• Column-level documentation is absent; field semantics must be inferred after download.
• Last update date is unknown; freshness unverified.
• Row count is unknown, which may limit suitability assessment.

Provenance

Source

Animal and Plant Health Agency (APHA), Government Digital Service

Collection Method

Random selection of one isolate per breakdown from bovine tuberculosis cases.

Time Range

Data is attributed to 2016; specific collection period is unknown.

Freshness

Last updated is unknown; data is from 2016.

Geography

Great Britain