Whole genome sequencing data for a novel bacterial strain, PAMC 27389, isolated from terrestrial soil on King George Island, Antarctica, and four reference type strains from the genus Pseudorhodobacter. The Antarctic soil sample was collected on February 12, 2011, and the dataset was contributed by the organization AMD_KOPRI. The data was generated to investigate genome relatedness for taxonomic analysis.
Use Cases
- Comparative genomic analysis based on whole genome sequences of multiple Pseudorhodobacter strains.
- Taxonomic classification and novel strain identification based on genome relatedness data.
- Studying microbial adaptation to extreme environments based on Antarctic soil sample provenance.
Strengths
- Data includes a novel bacterial strain isolated from a specific Antarctic location (62°12.37’S, 58° 47.40’W).
- Includes four reference type strains from established culture collections (KCTC, LMG) for comparison.
- Sample collection date (February 12, 2011) and detailed cultivation conditions are documented.
Limitations
- Column-level documentation is absent; field semantics must be inferred after download.
- Row count is unknown, which may limit suitability assessment.
- Last update date is unknown; freshness unverified.
Provenance
- Source
- AMD_KOPRI via nasa_earthdata
- Collection Method
- Whole genome sequencing of bacterial isolates cultured from a terrestrial soil sample.
- Time Range
- Sample collected on February 12, 2011.
- Freshness
- null
- Geography
- King George Island, Antarctica (62°12.37’S, 58° 47.40’W).