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Cell biology, microbiology, ecology, biodiversity, species data, evolutionary biology
23,882 datasets
A 14-year study from a Monitoring Avian Productivity and Survivorship (MAPS) station documents the impact of an invasive shot hole borer beetle on a riparian bird community in the Tijuana River, California. The dataset, authored by Barbara E. Kus and published on figshare, compares 7 pre-infestation years (2009-2015) with 7 post-infestation years (2017-2023), tracking changes in species abundance and richness. Adult bird captures declined by 27% immediately after the infestation, with some species declining up to 76%, while others showed increases.
15 bacteriophage genomes infecting Xanthomonas arboricola pv. pruni were isolated from North Carolina orchards over four decades. Katherine M. D'Amico-Willman's comparative genomic analysis defined a new genus and species, Duraznoxanthovirus arenicola, and proposed a taxonomic restructuring within the Anamaviridae family. This 60.5 KB Excel file likely contains genomic and phylogenetic data supporting these findings.
15 bacteriophages infecting Xanthomonas arboricola pv. pruni were isolated from North Carolina orchards over four decades. Comparative genomic analysis revealed two temporally distinct clades with >95% nucleotide identity and 63 conserved core genes, defining the new genus Duraznoxanthovirus arenicola. This work provides a family-level taxonomic framework for phages infecting plant-associated bacteria.
15 bacteriophage genomes infecting Xanthomonas arboricola pv. pruni, the causal agent of bacterial spot on peach, isolated from North Carolina orchards over four decades. Comparative genomic and phylogenetic analyses define a new genus and species, Duraznoxanthovirus arenicola, and propose a broader taxonomic restructuring within the family Anamaviridae. The dataset provides a family-level framework for phages infecting plant-associated bacteria.
15 bacteriophage genomes infecting Xanthomonas arboricola pv. pruni, the causal agent of bacterial spot on peach, were isolated over four decades from North Carolina orchards. Comparative genomic and phylogenetic analyses by Katherine M. D'Amico-Willman defined a new genus and species, Duraznoxanthovirus arenicola, and proposed a broader taxonomic restructuring within the family Anamaviridae. The dataset was last updated on April 29, 2026 and is available as a 24.8 KB DOCX file.
Davit Janelidze's dataset contains 601 complete staphylococcal msrA coding sequences retrieved from GenBank. It details 41 allelic variants, evolutionary analyses, and transmission pathways, last updated on 2026-04 22. The data is licensed under CC-BY-4.0.
Bird Island sea water temperature data collected by deployed loggers. The data collection period spans from 14 February 2013 to 04 February 2016. The dataset is provided by the Australian Ocean Data Network.
February 2009 bushfire severity data for Victoria, Australia, derived from SPOT and Landsat satellite imagery and validated with ground control. The classification covers an area of approximately 460 by 300 kilometers, clipped to the fire-affected lands of about 400,000 hectares. It was produced by the Department of Energy, Environment and Climate Action.
609 southern elephant seals were tracked over multiple decades, providing a dataset linking dive behavior to foraging success. The data supports a 2025 PeerJ paper analyzing how transit rates and dive durations change with successful foraging. It is hosted by the Australian Ocean Data Network and includes analysis workflows for reproducing the study's figures.
Ward et al. (2025) provide supplementary data and code for a co-produced qualitative network modeling study of the Heard and McDonald Islands (HIMI) Patagonian toothfish fishery. The dataset contains outputs from 128 qualitative network models, each with 10,000 simulated quantitative instances, used to explore system responses to environmental, ecological, and fishery changes. The data and code are hosted by the Australian Ocean Data Network and were last updated in April 2026.
The Ministry of the Environment of Japan publishes the Annual Report on the Environment, the Sound Material-Cycle Society and the Biodiversity in Japan 2019. This official report likely contains policy analysis, progress metrics, and strategic plans related to environmental management and conservation. Its availability in HTML and PDF formats suggests it is a structured document intended for public dissemination.
2020 data and analysis from Japan's Ministry of the Environment on environmental policy, the sound material-cycle society, and biodiversity. The report is an official government white paper, likely containing policy assessments, progress metrics, and strategic plans. It is available in HTML and PDF formats and is published by the Ministry's Comprehensive Policy Division, Environmental Planning Office.
Annual Report on the Environment, the Sound Material-Cycle Society and the Biodiversity in Japan 2024 is an official government publication by Japan's Ministry of the Environment. The report likely contains policy analysis, progress metrics, and textual summaries related to waste management, energy, and biodiversity. It is available in HTML and PDF formats.
Konza Natural Research Area in Kansas is a tallgrass prairie with a biologically heterogeneous environment rich in native plant species. The FIFE Vegetation Species Reference Data Set associates plant species found there with their common and Latin names. It serves as a translation key for species codes used in other FIFE vegetation data sets.
Integrated Marine Observing Systems (IMOS) data provides phytoplankton abundance and biovolume estimates from nine National Reference Stations around Australia. Samples are collected monthly via integrated water sampling at 10-meter depth intervals and analyzed for community composition and biovolume. Taxonomic resolution has evolved over time, requiring users to consult change logs for data validity.
Data from 1995 to 2009, with 95% of maps having a reliability date of 1994 or later, covers a 160 km by 238 km area in Western Australia. The dataset, from Geoscience Australia, includes natural and constructed features like roads, vegetation, and contours, as well as a satellite image overlay. It is part of a series of 513 maps covering all of Australia.
73,469 distribution records detail the presence of 400 alien invasive plant species across 2,684 administrative counties in China, covering 92.5% of the country's counties. Yingbo Yang compiled this database by integrating herbarium records, literature, and GBIF data, with records spanning from 1607 to 2023. It provides 2.58 times more distribution records than global repositories like GBIF and includes the earliest introduction dates for each species.
Seven northern Australian estuaries were examined using the Digital Earth Australia Landsat archive to map intertidal areas and mangrove extent. The analysis employed tide-tagged imagery and an Intertidal Extent Model to produce cloud-free composites and detect habitat change over a three-decade period. This report, part of the A12 Northern Seascapes Scoping Project, demonstrates the potential for monitoring coastal habitats critical for threatened and migratory species.
Hurricane Otto in 2016 provided Costa Rica's first hurricane in decades, creating a natural experiment. This dataset, authored by Natalie Westwood, likely contains measurements of invertebrate diversity, abundance, and composition in aquatic treeholes, contrasting hurricane-generated forest gaps with litter from intact versus fragmented forests. Litter decomposition rates are also likely included.
Replication Data for ZooMS Analysis of Archaeological Bone Tools from the South American Lowlands in the Paranรก Basin provides results from a proteomic study of bone artifacts. The dataset likely contains taxonomic identifications for 32 bone tools, revealing 13 camelid bones. It was authored by Natacha Buc and harvested from Borealis Dataverse on June 20, 2026.