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DNA/RNA sequences, gene expression, protein structures, metagenomics, single-cell sequencing
22,875 datasets
Tim Godec's dataset contains results from a functional genomics screen investigating tolerance to the herbicides paraquat and diuron in the green alga Chlamydomonas reinhardtii. The 1.3 MB XLSX file, last updated in May 2026, maps nuclear-encoded pathways and nontarget-site resistance mechanisms. The study identified genes related to photosynthetic machinery assembly, intracellular trafficking, and metabolic energy conservation.
Tim Godec's dataset contains results from a functional genomics screen investigating tolerance to the herbicides paraquat and diuron in the green alga Chlamydomonas reinhardtii. The 1.3 MB XLSX file, last updated in May 2026, maps nuclear-encoded pathways and nontarget-site resistance mechanisms. The study identified genes related to photosynthetic machinery assembly, intracellular trafficking, and metabolic energy conservation.
16,783 Yorkshire pigs were recruited from a commercial breeding farm for genomic analysis. Tail tissue samples were genotyped using an 80K array, resulting in 15,457,739 SNPs after quality control, and five key production traits were collected. The dataset was created by Xiaolei Liu and last updated on April 22, 2026.
1990 to 2021 data from the Global Burden of Disease 2021 study on maternal sepsis and other maternal infections (MSMI). It includes temporal trend analysis and projections, plus multivariable Mendelian randomization results for causal factors. The dataset was authored by Anqi Jiang and last updated in May 2026.
From 1990 to 2021, this dataset contains original data on maternal sepsis and other maternal infections (MSMI) from the Global Burden of Disease 2021 study. It was uploaded by Anqi Jiang and includes results from temporal trend analysis and Mendelian randomization. The data is packaged in a 37.4 MB ZIP file.
216 undergraduate students from southern China participated in a two-stage longitudinal study on computational thinking and artificial intelligence literacy. The dataset includes indicator loadings from structural equation modeling analysis, showing a significant positive effect of computational thinking on AI literacy. The data was collected by Qiuyu Li and last updated in May 2026.
An optimized workflow for applying Xenium automated in situ sequencing to PAXgene-fixed paraffin-embedded tissues. The dataset, authored by Kenny Roberts and last updated in May 2026, includes PNG files totaling 30.6 MB that likely contain results from systematic tests of permeabilisation conditions across multiple mouse and human tissues. It demonstrates that pepsin digestion can enhance RNA accessibility in PFPE samples to achieve spatial transcript detection comparable to FFPE and fresh frozen samples.
NSW Spatial Services provides the foundational digital cadastral database for land ownership in New South Wales. The dataset defines parcels of land created on survey plans, including lot numbers, plan numbers, and title status. Updates are sourced from subdivision, registration, and gazettal activity, with data typically current within 10 working days from plan lodgement.
100 differentially expressed miRNAs were identified in DMD muscle tissue, with miR-30c-5p being the most downregulated. Yayu Wang published this integrated analysis of bulk, small, and single-cell RNA-seq data on figshare in May 2026. The dataset likely contains results from differential expression, target prediction, and pathway enrichment analyses.
Yayu Wang published a dataset on figshare in May 2026. It contains results from an integrated analysis of RNA-seq data to investigate miRNA-mRNA regulatory networks in Duchenne muscular dystrophy. The data likely includes differential expression results for miRNAs and genes, such as miR-30c-5p and SOCS3, from studies in mdx mice and cell models.
100 differentially expressed miRNAs were identified in Duchenne muscular dystrophy muscle tissue. Yayu Wang published this dataset on figshare in May 2026. It likely contains results from integrated RNA-seq analyses of GSE38417, GSE109178, GSE157668, and GSE213925 datasets.
A genome-wide functional genomics screen in the green alga Chlamydomonas reinhardtii investigated tolerance to the herbicides paraquat and diuron. The dataset, authored by Tim Godec and last updated in May 2026, successfully uncovered nuclear-encoded pathways governing susceptibility, including genes for photosynthetic machinery assembly and novel non-target-site resistance mechanisms. The findings provide mechanistic insights to advance ecotoxicological risk assessments.
A functional genomics study maps genetic pathways for tolerance to the herbicides paraquat and diuron in the green alga Chlamydomonas reinhardtii. The dataset, created by Tim Godec and last updated in May 2026, includes 63.8 MB of results from a genome-wide screen identifying nuclear-encoded and non-target-site resistance mechanisms.
320 shared signature genes identified between Parkinson's disease and ulcerative colitis. This supplementary dataset from a manuscript submitted to NPJ Parkinson's Disease includes differential expression lists, functional enrichment results, immune cell deconvolution profiles, and predicted regulatory networks. The data, authored by Xiaohui Sun and last updated in April 2026, is provided in Excel format under a CC-BY-4.0 license.
Anjum Shahzad provides processed data and Python scripts for a genomics study on subgenome dominance in allotetraploid cyprinid fish. The repository includes scripts for data cleaning, gene mapping, phylogenetic tree generation, and dominance analysis. The dataset was last updated on May 3, 2026, and is shared under a CC-BY-4.0 license.
Two new highly sensitive multiplexed amplicon sequencing panels, PvGTSeq and PvCRiSP, enable genomic surveillance of Plasmodium vivax malaria. The dataset, shared by Paulo C. Manrique-Valverde on figshare under a CC-BY-4.0 license, contains country-level data validated with samples from Colombia, Guyana, Honduras, Panama, and Venezuela. PvGTSeq requires selective whole-genome amplification and contains 249 amplicons, while PvCRiSP features four highly polymorphic amplicons and operates without sWGA.
NOAA-20 satellite data provides a Level 2 cloud mask product at 750-meter spatial resolution. The dataset is derived from the MODIS-VIIRS cloud mask algorithm, designed to sustain long-term records from MODIS and VIIRS satellite heritages. It contains spectral test results for cloud detection over a 6-minute swath.
A land suitability map for cacao (Theobroma cacao) cultivation in Colombia's Huila department, produced in December 2019. The dataset results from a land evaluation methodology applied at a 1:100,000 scale under an inter-administrative agreement. It classifies areas into five categories from 'High Suitability' to 'Legal Exclusion' to guide agricultural planning and policy.
A 33.1 MB collection of genome annotation files for the bacterial strain Sphingobacterium faecium PAMC25397. The dataset includes structural annotation outputs from Prokka v1.14.6 and functional annotations from eggNOG-mapper v2.1.12. Author minsu kim submitted the data alongside a manuscript to Microbiology Resource Announcements.
Processed datasets of single-cell RNA-seq and bulk RNA-seq from lineage tracing experiments on A549 cells. The data, authored by Yongjie Lin and last updated in April 2026, includes experiments conducted both in vitro and in vivo using barcode lentivirus pools and 10X Genomics Chromium protocols. The dataset is 278.4 MB in size and is available in RDS, CSV, and TXT file formats under a CC-BY-4.0 license.