Crystal Structure of YTHDC1 with Fragment 9 (DHU_DC1_107)

A dataset from the University of Zurich likely contains structural data on the protein YTHDC1 bound to a small molecule fragment. The data is associated with a specific crystal structure identified as DHU_DC1_107. It was published on the paperswithcode platform by author R.K. Bedi.

Use Cases

• Train a model to predict protein-fragment binding poses (inferred from domain, verify after download)
• Analyze structural features of the YTHDC1 binding pocket (inferred from domain, verify after download)
• Benchmark docking algorithms against a crystallographic structure (inferred from domain, verify after download)

Strengths

• Published on the paperswithcode platform, which aggregates research datasets.
• Associated with a specific, identifiable crystal structure (DHU_DC1_107).
• Author affiliation is the University of Zurich.

Limitations

• Metadata is minimal; actual content requires verification after download.
• Column-level documentation is absent; field semantics must be inferred after download.
• The license is listed as 'closed', which may restrict usage.

Provenance

Source

University of Zurich

Collection Method

Likely derived from X-ray crystallography experiments.