Aquilaria sinensis RK2 and PT: Genome Annotation of Elite and Ordinary Germplasm

Genome gene annotation files for two Aquilaria sinensis (agarwood) germplasm types: the elite 'Qi-Nan' cultivar 'Reke2' (RK2) and an ordinary type (PT). The dataset is a 126.9 MB GFF3 file authored by Weicheng Huang and last updated on April 13, 2026. It is shared under a CC-BY-4.0 license on the figshare platform.

Use Cases

• Comparative genomics analysis based on the elite versus ordinary germplasm distinction.
• Gene structure and function prediction based on genome annotation data.
• Phylogenetic studies of Aquilaria sinensis based on annotated genomic features.
• Marker-assisted selection for agarwood quality based on genetic differences between germplasm types.

Strengths

• File size of 126.9 MB suggests a substantial annotation dataset.
• Direct comparison of elite and ordinary germplasm types is a specific research focus.
• Uses the standard GFF3 format for genome annotation.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• Description metadata is limited; actual data quality requires manual inspection after download.

Provenance

Source

Weicheng Huang via figshare.

Collection Method

Genome annotation, likely from sequencing and assembly of the specified germplasm.

Time Range

Publication date is April 13, 2026; temporal coverage of the underlying biological samples is unknown.

Freshness

Last updated 2026-04-13 02:32:00; freshness should be verified.

Geography

Spatial coverage is unknown; the plant species Aquilaria sinensis is native to Southeast Asia.