List of Crystal Structures for Designed Proteins with Helical and Mixed Topologies

A table listing protein designs and their corresponding experimentally determined crystal structures. The dataset, created by Hugh K. Haddox and updated in April 2026, is a 9.7 KB XLSX file. It references a GitHub repository containing the actual Protein Data Bank (PDB) files for each design model and its crystal structure.

Use Cases

• Cross-referencing computational protein designs with their experimental crystal structures based on the provided table.
• Analyzing the relationship between design models and solved structures for validation studies.
• Studying the prevalence of helical versus mixed alpha/beta topologies in designed proteins as mentioned in the description.

Strengths

• Explicitly links to source PDB files in a public GitHub repository for direct data access.
• Provides a clear categorization of protein topologies (helical, mixed α/β, β barrel) as stated in the description.
• Released under a permissive CC-BY-4.0 license for broad reuse.

Limitations

• Row count is unknown, which may limit suitability assessment.
• Column-level documentation is absent; field semantics must be inferred after download.
• The 9.7 KB size indicates the dataset is a small index or list, not the primary structural data.

Provenance

Source

figshare

Collection Method

Likely compiled from the author's own research, as it references a personal GitHub repository.

Time Range

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Freshness

Last updated 2026-04-22 17:37:52; freshness should be verified.

Geography

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