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Cell biology, microbiology, ecology, biodiversity, species data, evolutionary biology
24,910 datasets
Autonomous Reef Monitoring Structures (ARMS) were deployed across the Hawaiian Archipelago, Mariana Archipelago, American Samoa, and Pacific Remote Island Areas between 2010 and 2012 to systematically sample cryptic reef organisms. This dataset, created by NOAA's Coral Reef Ecosystem Program (CREP) in partnership with the Census of Marine Life, supports a long-term program for sustainable coral reef management. The standardized ARMS method collects invertebrates over a precise surface area, enabling consistent biodiversity monitoring over time.
52 long-term monitoring sites across Saipan, Tinian, and Rota are surveyed biennially across three habitat types: fore reef, reef flat, and seagrass beds. The protocol includes photo quadrat analysis for benthic cover, stationary point counts for fish assemblages, and coral colony surveys, providing data on species composition, size distribution, and biomass. Sites were selected based on association with management concerns and actions, including both impacted and reference locations.
Accuracy results for four time spans evaluate an automated LLM-based method for extracting species mentions from historical texts. The method achieved 92.6% recall and 95.3% precision for species detection, with 83.0% accuracy for linking mentions to GBIF identifiers. This 5.5 KB dataset, created by Maximilian C. Teich, demonstrates a scalable approach for generating biodiversity datasets from archival material.
Accuracy results for an automated LLM-based pipeline that identifies and links species mentions in 19th-century German texts to GBIF identifiers. The evaluation reports high recall (92.6%) and precision (95.3%) for species detection, with 83.0% accuracy for correct species identifier assignment. The dataset supports the scalable generation of biodiversity data from historical sources.
October 2-10, 2014 data from a research cruise targeting demersal fish in the DeSoto Canyon, Gulf of Mexico. The dataset contains species catch records and associated tissue samples collected via longline and chevron trap sets at depths from 75 to 2000 meters. It was produced by NOAA as part of research on hydrocarbon exposure and deep-sea ecology following the Deepwater Horizon oil spill.
A quick reference guide for using the Species and Habitat Viewer (SHV). It provides instructional content on how to navigate and utilize the viewer's features. The guide was published by the Government of Northwest Territories and was last updated in April 2026.
Central California's Devil's Slide Rock seabird colony is documented in this digital collection of aerial photographs from 1997. The U.S. Fish and Wildlife Service created the images to establish a baseline for the Common Murre Restoration Project, which aims to reestablish a colony of nearly 3,000 birds lost in the early 1980s. The dataset consists of scanned 35mm color slides from aerial surveys, archived by the National Oceanic and Atmospheric Administration.
New planting and restocking data for the UK from 1976 to 2016, broken down by country, sector, and tree type. The dataset provides supporting data for the National Statistics release on Woodland Area, Planting and Restocking. It is published by the Government Digital Service and is associated with the Forestry Statistics and Forestry Facts & Figures publications.
1976 to 2018 data on new planting and restocking in the UK. The dataset is broken down by UK constituent countries, planting type, tree species, and sector. It is provided by the Government Digital Service to support official National Statistics releases on woodland area.
United Kingdom data on new planting and restocking from 1976 to 2017. The dataset is broken down by constituent countries, planting type, tree species, and sector. It provides supporting data for the National Statistics release on Woodland Area, Planting and Restocking.
New planting and restocking data for the UK from 1976 to 2015. The dataset is broken down by country, planting type, tree species, and sector. It provides supporting data for the National Statistics release on Woodland Area, Planting and Restocking.
A figshare-hosted dataset by Jie Wang, last updated March 2026, containing experimental results on the glycine cleavage system in Fusarium graminearum. The 11.5 KB file includes data from a study characterizing two GCVT homologs, their impact on sexual reproduction, glycine content, and stress tolerance, supported by transcriptome analysis identifying 1,482 differentially expressed genes.
1,482 differentially expressed genes were identified in a ΔFgGCV1 mutant of Fusarium graminearum. The dataset contains experimental results linking the glycine cleavage system protein FgGCV1 to glycine metabolism and sexual reproduction in the fungal pathogen. Jie Wang published the data under a CC-BY-4.0 license on figshare in March 2026.
A 12.0 KB Excel dataset from a 2026 study by Jie Wang on Fusarium graminearum. It contains data from experiments characterizing the GCVT protein homologs FgGCV1 and FgGCV2, including phenotypic observations and transcriptome analysis results. The dataset supports findings on glycine metabolism's role in the pathogen's sexual reproduction.
1,482 differentially expressed genes (DEGs) were identified in a study of the FgGCV1 gene's role in Fusarium graminearum. The research, authored by Jie Wang and last updated in March 2026, characterizes how the glycine cleavage system T protein regulates glycine metabolism and sexual reproduction in this fungal pathogen. The dataset includes transcriptome analysis results from mutant strains.
Ninety adult female C57BL/6N mice were used to investigate the combined effect of Bumetanide and MGE cell transplantation on neuropathic pain after spinal cord injury. The dataset, authored by Yang Yu and last updated in March 2026, includes results from behavioral assessments, ELISA, Western blotting, qRT-PCR, and immunofluorescence staining. It provides evidence on mechanisms involving the NF-κB pathway, microglia activation, and GABAergic signaling.
The IPIEDT is an Access Database tool used to prioritize invasive plant species and areas for inventory at Camas National Wildlife Refuge. A workshop in October 2019 defined initial priorities, and an updated species prioritization incorporating data from 2020 to 2022 was completed in 2022. The Department of the Interior archives the resulting data tables as CSV files and the database tool.
A 2012 survey of the Solitary Islands Key Ecological Feature collected forward-facing mono and stereo video, downward-facing still images, and USBL/GPS positional data. The survey, conducted by Geoscience Australia aboard the R.V. Bombora from August 7 to 16, aimed to characterize benthic habitats and compare visual capture methods. Data is organized by survey date and transect into folders for GoPro stereo video, Nikon stills, Streampix mono video, and Tracklink USBL positioning.
Regions defined by the Murray-Darling Basin Authority in 2014 summarize the area of water-dependent native vegetation for basin-wide environmental watering strategy. The dataset provides geospatial boundaries used for strategic water allocation planning. It was created by the Murray-Darling Basin Authority and updated in April 2026.
Regions defined for summarizing water-dependent native vegetation areas under the 2014 Basin-wide environmental watering strategy. The Murray-Darling Basin Authority created and maintains this geospatial dataset, which was last updated in April 2026.