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DNA/RNA sequences, gene expression, protein structures, metagenomics, single-cell sequencing
27,589 datasets
Elze Gooitzen Ufkes from Yale University coded 261 case files of neighbor conflicts reported to a Dutch neighborhood mediation program between 2006 and 2008. The data was used to analyze the role of conflict asymmetry in mediation processes. It examines the entire process from intake to follow-up, not just cases where mediation sessions occurred.
An inventory of 2536 school buildings in Central Sulawesi, Indonesia, developed by Eyitayo A. Opabola of University College London. The region was affected by the 2018 Palu earthquake, which damaged at least 1299 schools. The data includes building location, structural characteristics, vulnerabilities, and post-earthquake condition.
The Antarctic Circumnavigation Expedition (ACE) 2016/2017 collected one-minute average horizontal wind velocity data from legs 0 to 4. The data has been filtered for spurious observations and true wind correction was redone using quality-checked ship track velocity. This dataset, authored by Sebastian Landwehr of École Polytechnique Fédérale de Lausanne, is available under a Creative Commons Attribution 4.0 International License.
An open-source implementation of the Gartstein internal-coordinate potential with 13 parameters tuned on first-principles calculations for graphene. The potential, developed by Francesco Libbi at École Polytechnique Fédérale de Lausanne, can describe vibrational properties of graphene, carbon nanotubes of any diameter and chirality, and monolayer boron-nitride. The entry includes examples of phonon calculations for these systems.
Five-minute averaged horizontal wind velocity data from the Antarctic Circumnavigation Expedition (ACE) 2016/2017 legs 0 to 4 has been corrected for air-flow distortion. The dataset combines port and starboard anemometer measurements via vector averaging and estimates ten-meter neutral wind speed using ERA-5 surface heat fluxes and the COARE 3.5 drag coefficient. It provides a continuous, high-resolution record of wind speed and direction along the ship's track.
A method and likely associated data for detecting signal regions in whole genome association studies, developed by Zilin Li of Harvard University. The proposed Q-SCAN statistic scans the genome continuously to detect regions associated with disease outcomes, accounting for genetic variant correlation and allowing for mixed effect directions. The method was evaluated using simulation studies and applied to WGS data from the Atherosclerosis Risk in Communities study.
A 2015-2016 project from the Australian Ocean Data Network validates coral geochemical records as proxies for suspended sediment loads. The project compares trace element ratios from 2012 coral cores with measured sediment and nutrient loads from the Burdekin River. This work addresses a lack of replication for records widely cited as evidence of increased sediment delivery since the 1850s.
Georg Schramm from Stanford University provides a dataset of 20 simulated subjects based on normal anatomical models from the BrainWeb phantom. Each subject includes three simulated PET contrast images, an attenuation image, and a high-resolution T1 MR scan, all with a shape of (220,220,184) and 1mm isotropic voxel size in NIfTI format. The anatomical models and T1 scans used to create the ground truth PET images originate from the BrainWeb: Simulated Brain Database.
A series of 6 behavioral studies led by Francis J. Flynn of Stanford University tested whether people underestimate others' likelihood of complying with direct requests for help. The first three studies found underestimations of up to 50% across experimental and natural field settings. Subsequent studies explored the source of this bias, finding help seekers undervalued the social costs of refusal.
Emma MacKie of Stanford University provides a database of 166 topographic training images for subglacial terrain. The data is a 40,000 x 166 matrix, where each column reshapes to a 200x200 pixel image representing a 100x100 km area with a 500-meter resolution. Elevation data originates from the ArcticDEM and IBCSO bathymetric compilations, as cited in Yin et al. (2022).
MarFERReT is a version-controlled reference library of protein sequences for marine microbial eukaryotes, designed for taxonomic annotation of metatranscriptomic data. The library contains sequences from 800 validated marine eukaryotic genomes and transcriptomes, covering 453 species- and strain-level taxa. It includes associated NCBI and PR2 taxonomy identifiers and Pfam functional annotations to support analysis of actively transcribed genes in environmental samples.
University of Helsinki researchers created this dataset for testing image deblurring algorithms. It contains photographs of text strings, natural images, and QR codes, each with a blurred and a sharp version, captured with two cameras. The dataset includes 20 steps of different blur levels, with text images accompanied by ground-truth transcription files.
Two sets of surface electromyography recordings from 22 and 10 subjects performing pinch and rock-paper-scissors hand gestures, respectively. The data was recorded using a Myo armband at 200 Hz and includes annotations for each gesture. Elisa Donati of ETH Zurich authored the dataset, which is associated with a 2018 IEEE BioCAS conference publication.
Surface electromyography (sEMG) recordings from the forearm for hand gesture recognition. The dataset contains two sets: one with 4 pinch gestures recorded from 22 subjects, and another with 3 rock-paper-scissors gestures recorded from 10 subjects. Data was collected by Elisa Donati at ETH Zurich using a Myo armband with 8 sensors at 200 Hz, with each gesture recorded 5 times per session.
The Antarctic Circumnavigation Expedition during the austral summer of 2016/2017 provides this dataset of distances from the ship's five-minute averaged GPS track to the nearest coastline, including small subantarctic islands. It was created by Michele Volpi at ETH Zurich by processing GPS data and shapefiles from NaturalEarth, with manual additions for unmapped islands. The derived data is available under a Creative Commons Attribution 4.0 International License.
ETH Zurich researcher Danang Crysnanto provides data supporting experiments with breed-specific augmented reference graphs for cattle and human genomes. The dataset includes simulated reads, variant files, consensus genomes, and whole-genome graphs for Brown Swiss cattle, alongside similar data for human populations. It is organized into compressed folders for cattle and human genome graph experiments.
Historical readings for soil sensors monitoring salinity, temperature, and moisture in parks across the City of Melbourne. The dataset contains a large number of records and can be joined to a separate sensor locations dataset using a site ID. Data is provided by City of Melbourne Open Data and was last updated in June 2026.
Historical data for calendar year 2022 from soil sensors in parks across the City of Melbourne. The dataset contains readings for salinity, temperature, and moisture, with units included. It is published by City of Melbourne Open Data under a CC-BY-4.0 license.
Victoria, British Columbia, is analyzed for changes in buildings, roads, and forest cover using satellite imagery from the 2000s, 2010s, and 2020s. Natural Resources Canada produced this dataset by intersecting GeoAI-extracted features with Statistics Canada's Open Database of Buildings and National Roads Network. The analysis enables tracking of urban development and environmental changes over time.
Natural England's 2021 dataset categorizes land in Northumberland, Durham, Tyne & Wear, and Tees Valley into four risk zones for great crested newt conservation. Red zones contain regionally or nationally important populations, including designated Sites of Special Scientific Interest, while amber and green zones represent main population centers and sparse distributions, respectively. The data is derived from multiple sources including land cover maps, Ordnance Survey data, and freshwater habitat monitoring.