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Cell biology, microbiology, ecology, biodiversity, species data, evolutionary biology
23,924 datasets
Nine stations around the Australian coastline are sampled monthly for zooplankton, with three samples taken each month. The dataset includes estimates for community composition, biomass, and size spectrum, with data from Port Hacking station available from 2002. It is collected by the Integrated Marine Observing System (IMOS) National Reference Stations and made available via the Australian Ocean Data Network.
An Excel file containing curated pathway lists with supporting literature references for four spatially-resolved transcriptomics datasets used in a benchmarking analysis. The file includes tables for IPMN, DLPFC, MOSTA mouse embryo, and Xenium lung cancer datasets. Author Li-Ting Ku published the file under a CC-BY-4.0 license on figshare in May 2026.
Chuanhong Liu's dataset, last updated May 8, 2026, identifies 157 C2 domain-containing protein (BrC2DP) genes in Chinese cabbage. The data includes phylogenetic classification into 7 groups, identification of 112 duplicated gene pairs, and expression analysis under drought stress, highlighting the BrC2DP56 gene. This work provides a theoretical basis for exploring drought response mechanisms in the BrC2DP family.
A 2026 study by Chuanhong Liu identified 157 BrC2DP gene family members across 10 chromosomes in Chinese cabbage. The research includes phylogenetic classification into 7 groups and expression analysis under drought stress, identifying BrC2DP56 as a negative regulator. The dataset, shared under a CC-BY-4.0 license, provides a theoretical basis for exploring drought response mechanisms.
Northeast Pacific, Canadian Arctic, and Northwest Atlantic ocean subregions were sampled in 2022 for an exploratory project on decapod diversity. The dataset includes 391 decapod species occurrences, with DNA extracted and COI gene sequences generated for a subset of 87 specimens. The work was undertaken by the Arctic Working Group under the Canada-U.S. Fisheries and Climate Collaboration between Fisheries and Oceans Canada and NOAA's National Marine Fisheries Service.
Lizard Island, Australia, is the location for this genetic and ecological dataset supporting a manuscript titled 'Extraordinary longevity in an endangered sea cucumber revealed by 24 year genetic mark–recapture'. The data and associated R scripts were published by the Australian Ocean Data Network and last updated in June 2026.
594 bacterial isolates from tomato rhizosphere and phyllosphere were analyzed to identify antagonists of Phytophthora infestans. The dataset, created by Philemon Orwa and last updated on 2026-05-01, includes results from culture-dependent isolation, functional profiling, and 16S rRNA microbiome analysis of plants from organic farms in Germany. It identifies 84 isolates that inhibited P. infestans and links community-level microbiome patterns to effective biocontrol candidates.
Rhine-Main region of Germany organic tomato farms provided soil for a study of healthy and Phytophthora infestans-challenged plants. The dataset contains results from 594 bacterial isolates, identifying 84 that inhibited P. infestans, with functional screening and amplicon-based microbiome analysis. It was authored by Philemon Orwa and last updated on 2026-05-01.
Philemon Orwa published a dataset on 2026-05-01 containing results from a study linking tomato microbiome structure to functional analysis. The data likely includes results from 594 bacterial isolates, 84 of which inhibited Phytophthora infestans, and amplicon-based microbiome analyses from tomato plants cultivated in soils from organic farms in Germany's Rhine-Main region.
594 bacterial isolates from tomato rhizosphere and phyllosphere were screened to identify antagonists of Phytophthora infestans. The research, authored by Philemon Orwa and last updated in May 2026, links microbial community profiling with functional screening and in planta assays. It identifies 84 isolates that inhibited P. infestans, with Pseudarthrobacter sp._Pb177 highlighted as a novel and effective antagonist.
A 2026 analysis by Geoscience Australia models the frequency and magnitude of physical seabed disturbance from waves and currents across Australia's continental shelf. The study applies the intermediate disturbance hypothesis to derive a dimensionless ecological disturbance index, predicting spatial patterns of disturbance regimes. This work represents a first-of-its-kind analysis for any continental shelf on Earth.
A PDF document by Nikolay Oskolkov, last updated on 2026-05-18, presenting a benchmarking study of filtering strategies for the Kraken family of taxonomic classification tools. The study uses simulated microbial and environmental ancient metagenomic data to evaluate approaches based on sensitivity and specificity. It proposes an optimal thresholding strategy tailored to specific sequencing depths in ancient metagenomic datasets.
A 2006 survey conducted by the National Oceanic and Atmospheric Administration (NOAA) to estimate public preferences for marine protected area (MPA) design. The dataset likely contains results from a choice experiment analyzing the existence value of protecting species and habitat diversity based on area size and allowable uses. It applies a latent class specification to model heterogeneous preferences across three identified user groups.
Yuan Zhong published this dataset on figshare in 2026. It contains data from a study investigating the protective effects of the flavonoid Wogonoside against hyperosmotic stress in human corneal epithelial cells. The dataset likely includes results from network pharmacology, molecular docking, and in vitro cell assays measuring viability, apoptosis, and inflammatory markers.
Experimental data from a study investigating the protective effects of the flavonoid Wogonoside on human corneal epithelial cells under hyperosmotic stress. The dataset, shared by Yuan Zhong under a CC-BY-4.0 license, includes results from network pharmacology, molecular docking, and cellular assays measuring viability, apoptosis, and inflammatory markers. It was last updated on 2026-05-04.
The GEDI instrument collected data from 2019 to 2023, with a hibernation period from March 17, 2023, to April 24, 2024, before resuming operations on April 26, 2024. It provides high-resolution laser ranging observations of Earth's 3D structure from the International Space Station, covering latitudes between 51.6° N and 51.6° S. The Level 2A product contains 156 layers per beam, including ground elevation, canopy top height, and relative height metrics derived from waveform data.
Tian Chengzong's dataset analyzes biotic resistance to fish invasions using data from 2,622 river basins worldwide. It quantifies how native species niche differentiation, phylogenetic and functional diversity, richness, and environmental factors contribute to non-native fish richness and occurrence. The dataset was last updated on April 24, 2026.
A 64.4 KB dataset contains data from a two-year experimental study assessing the response of saproxylic insects to a catastrophic hurricane disturbance. The study compares mature continuous forest with human-disturbed forest fragments. The dataset was authored by Samuel Novais and last updated on 2026-06-01.
235 studies reporting 54,239 animal Klebsiella pneumoniae isolates across 44 species in China were synthesized for this meta-analysis. The dataset provides supplementary and raw data for a manuscript analyzing prevalence, ecological structure, and resistance and virulence determinants. It was authored by Jiabao Xing and last updated on April 17, 2026.
Two years of field monitoring on two groups of Critically Endangered Hainan gibbons (Nomascus hainanus) in old growth and secondary forest. Wei Yang recorded gibbon behaviors at 5-minute intervals and spatial locations at 15-minute intervals, analyzing movement directionality and search strategies. The dataset, last updated in 2026, likely contains detailed behavioral and spatial records in an XLSX file.