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DNA/RNA sequences, gene expression, protein structures, metagenomics, single-cell sequencing
23,804 datasets
Pangenome analysis carried out with Panaroo in 1096 Listeria monocytogenes genomes from food source origins. Genome nucleotide sequences were retrieved from NCBI Refseq, based on previously selected genomes of interest by Castelli et al. (https://doi.org/10.1186/s12864-023-09667-w). Proteins were annotated with Prokka.
Sean K. Simmons provides an annotated table of Sierra peaks for Parkinson's Disease and GTEx data. The dataset is available as an Excel file and was last updated in May 2026. It likely contains genomic feature annotations derived from single-nucleus RNA-seq analysis.
13 studies from a systematic review analyze the association between nocturnal asthma and worse symptom severity and pulmonary function. The data, compiled by Patricia Tachinardi, includes evidence from databases searched up to April 8, 2024. Findings reinforce the clinical significance of nocturnal symptoms for disease management.
Chemical Abrasion-Isotope Dilution Thermal Ionisation Mass Spectrometry (CA-IDTIMS) dating of volcanic tuffs provides numerical ages for Triassic palynological biozones. The dataset targets tuffs across Queensland, New South Wales, Tasmania, New Zealand, and Timor-Leste to recalibrate Australian biozones to the international geologic timescale. This work is from Geoscience Australia Data and was last updated on 2026-04-20.
Geoscience Australia data investigates the link between seagrass dieback and sediment sources in Torres Strait. The dataset includes sedimentological and geochemical properties, such as Cu/Al ratios, for seabed and suspended sediments near Saibai and Turnagain Islands. Findings suggest marine-derived sediments, not terrigenous inputs from New Guinea, may be a factor in the ecological changes.
250 contract records from a pilot project by Public Services and Procurement Canada to implement the Open Contracting Data Standard (OCDS). The data was compiled as part of Canada's 2018-2020 National Action Plan on Open Government and includes a cross-section of contracts, including major projects. A Lessons Learned Report documents the methodology used.
OmicsDatabase_WheatNexus is a 20.2 KB summary file of publicly available RNA-seq and metabolomic datasets related to wheat. It was authored by Matteo Bozzoli and last updated on 2026-05-30. The dataset focuses on nutrient availability, water stress, nitrogen use efficiency, and phosphorus availability.
Downsampled STK4 AluSq2 amplicon SHAPE/ADAR sequencing FASTQs serve as a demo dataset for the adar-shape-pipeline. The dataset includes reference sequences and primers, representing the full data to be deposited in GEO/SRA upon publication. Author Alain Laederach uploaded this dataset via the ODUM Harvested Dataverse platform.
Geoscience Australia Data provides a hydrogeological inventory for the Carnarvon Basin, a large sedimentary basin stretching over 1,000 km along the Western Australian coast. The dataset groups descriptive attributes into themes including location, geology, hydrogeology, groundwater management, and land use. The data was last updated on 2026-04-20.
Geoscience Australia and international partners developed a standardized tool for classifying seabed geomorphic features. The International Seabed Geomorphology Mapping Working Group's classifier implements a two-part mapping approach, assigning five levels of classification attributes and 16 additional descriptive attributes. The tool is designed as an Esri ArcGIS Pro Python tool to bring consistency to seabed mapping efforts.
Soumila Mondal published a study on 2026-04-22 evaluating a protein-based DNA delivery system for cyanobacteria. The research systematically tested BPP Bioportides BP-17 and BP-12 across strains including Synechocystis sp. PCC 6803 and Synechococcus elongatus PCC 7942. The 4.2 MB PDF details transformation efficiency improvements, optimization factors, and validation of genomic integration.
Distinctive Land Surface (DLS) Point is a point feature class defining features of discrete extent, such as reefs. The dataset is part of the NSW Physiography Category within the Foundation Spatial Data Framework (FSDF) and has been updated to the GDA2020 national spatial standard. It is provided by Spatial Services, a business unit of the Department of Customer Service NSW.
FSBEDIN meeting topics recorded from 2016 to 2025. The dataset is a 5.5 KB Excel file published on figshare under a CC-BY-4.0 license by Eloan dos Santos Pinheiro. It was last updated in May 2026.
Geological Structure Zones (1:1,000,000) contains structural zones of Victoria defined by Gray (1988) and updated by VandenBerg et al. (2000) and Cayley et al. (2018). Each zone encompasses rocks related in space and time or with a similar structural history, with boundaries usually defined by major faults. The dataset is provided by the Department of Energy, Environment and Climate Action and was last updated in April 2026.
A genome sequencing and assembly project for Phormia regina, the black blow fly, conducted by USDA-Agricultural Research Service. The dataset likely contains genomic sequence data and annotations. The project aims to provide insights into the evolution of feeding habits within the Calliphoridae family.
Experimental data from a study demonstrating the interaction between the host protein MOV10 and the rabies virus nucleoprotein (N) in an RNA-dependent manner. The dataset, authored by Yumeng Song and last updated on 2026-04-22, likely contains results from bimolecular fluorescence complementation, confocal microscopy, and a dual-luciferase reporter system. It supports the finding that MOV10 sequesters viral N-RNA templates into P-bodies to block RABV replication.
5.5 KB Excel file containing validation results for hub genes using the independent gastric cancer dataset GSE54129. The dataset was authored by Negar Mottaghi-Dastjerdi and last updated on 2026-05-21. It is available under a CC-BY-4.0 license.
A list of reception points for post-consumer waste collection campaigns in the Norte de Santander department of Colombia. The dataset includes details on the organizing program, municipality, business name, and address for each point. It is published on the datos.gov.co platform and was last updated in May 2026.
740,868 participants (31,254 cases; 709,614 controls) contributed to this summary-level genome-wide association study for Amyotrophic Lateral Sclerosis (ALS). The dataset includes chromosomal location, alleles, association metrics, and statistical significance. Fengzhen Liu published the data under a CC-BY-4.0 license on figshare, last updated on 2026-05-20.
Eastern North American beech leaf disease data integrates near-infrared spectroscopy and microbiome sequencing. The dataset, authored by Andrew Miles and last updated in 2026, likely contains spectral profiles and bacterial community data used to predict nematode abundance. It demonstrates the potential of NIR spectroscopy as a non-destructive tool for detecting forest disease.