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DNA/RNA sequences, gene expression, protein structures, metagenomics, single-cell sequencing
27,655 datasets
Acoustic Doppler Current Profiler (ADCP) data were collected by the Marine National Facility RV Investigator during voyage IN2024_V02, titled 'SOTS: Southern Ocean Time Series automated moorings for climate and carbon cycle studies southwest of Tasmania.' The voyage occurred between March 31, 2024 and April 19, 2024, departing from and returning to Hobart. Data were processed and archived by CSIRO National Collections and Marine Infrastructure (NCMI) Information and Data Centre (IDC).
The Microsoft Academic Knowledge Graph (MAKG) is a large RDF data set with over eight billion triples containing information about scientific publications and related entities. It is based on the Microsoft Academic Graph and was created by Michael Färber of the Karlsruhe Institute of Technology, with a paper published at ISWC'19 in 2019. The data set includes entity embeddings for all 210 million represented scientific papers.
Amino acid racemization (AAR) dating provides a geochronological framework for eolianite deposits on Lord Howe Island, ranging from the Holocene to the Middle Pleistocene. The dataset defines three aminozones based on racemization extents in land snails and whole-rock samples, correlating disparate successions and linking dune deposition to periods of high sea level. Data reliability is assessed through multiple samples per unit and consistency checks across seven amino acids.
Simulated read data analyzed in a study on removing reference bias in ancient DNA analysis. The dataset includes all possible 50 bp reads overlapping chromosome 11 SNPs from the Human Origins dataset, with simulated post-mortem damage based on 102 ancient genomes. It also contains simulated microbial read data from reference genomes identified in an ancient Clovis genome.
A paper from the University of Cambridge investigates coupling between electromagnetic surface waves on parallel wires. Finite-element method (FEM)-based and analytic models are developed for single- and double-wire Sommerfeld and Goubau lines, validated via measurements and computational comparisons. The results exhibit new effects for surface wave propagation over multiple conductors, including findings on short-range behavior and optimum wire separation.
61,637 terrorist events worldwide were recorded by the Pinkerton Global Intelligence Service between 1970 and 1997. The Global Terrorism Database 1.1 (GTD1.1) was developed by researchers at the University of Maryland, who supplemented the original PGIS data with incidents from other sources. Variables include group name, incident type, date, location, target details, weapons used, casualties, and outcomes like success or ransom.
More than 2000 replication datasets with over 9000 unique R files from the Harvard Dataverse repository, published between 2010 and 2020. The dataset accompanies a study by Ana Trisovic, Matthew K. Lau, Thomas Pasquier, and Mercè Crosas that analyzes code quality and execution success. The study found 74% of R files failed to execute without error initially, with failures reduced to 56% after automatic code cleaning.
Xing Zhu from the National Institutes of Health provides data on the conformational states of the Cas9-sgRNA-DNA ternary complex. The description details structural transitions, including a ~34-Å swing of the HNH nuclease domain between precatalytic and postcatalytic states. This data offers insights into the molecular mechanism of CRISPR-Cas9 genome editing.
An experimental dataset from a study on the inheritance of paternal experiences in C57Bl/6J mice. The data likely contains measurements from mice subjected to maternal separation and unpredictable stress protocols, with animal counts detailed in an associated figure. The dataset was produced by Katharina Gapp at the University of Zurich.
eQTL summary statistics and GWAS colocalization posterior probabilities from an admixed subcohort of GTEx v8. The data includes local and global ancestry adjustments and was produced by Nicole R. Gay of Stanford University. The dataset is associated with a preprint on bioRxiv and source code on GitHub and Zenodo.
Pouria Derakhshanfar from Delft University of Technology provides the replication package for the ASE 2020 study 'Good Things Come In Threes: Improving Search-based Crash Reproduction With Helper Objectives'. The dataset supports the evaluation of the MO-HO multi-objectivization approach, which was tested on 124 hard-to-reproduce crashes from open-source projects. Results indicate MO-HO reproduced five crashes unreproducible by prior methods and improved effectiveness by up to +10% in reproduction ratio.
30 million reads of simulated mouse ONT R10.4 data with a 2.8% error rate, alongside SIRV Set4 sequencing data, were used to benchmark the IsoQuant tool. The dataset includes multiple simulated and experimental RNA-seq files mapped to the GRCm39 genome or SIRV reference, created by Andrey D. Prjibelski. It also contains a reduced mouse GENCODE vM26 annotation with 15% of expressed isoforms removed.
Jee Ho Kang's systematic review, registered in PROSPERO, characterizes hypoglossal nerve palsy secondary to internal carotid artery dissection. The analysis includes 73 studies covering 87 patients, with a mean age of 48.5 years. The review was last updated on June 2, 2026, and is available as a 49.6 KB DOCX file.
Northern Ireland Civil Service data details the 2022 Staff Officer external recruitment campaign. It breaks down candidate demographics and progression through application stages, including numbers for applications, online tests, sift, and assessment centre passes. The dataset likely supports monitoring of diversity and equality in public sector hiring under Section 75 obligations.
21,418 Operational Taxonomic Units (OTUs) derived from 18S V4 rDNA sequences track marine plankton community changes over eight years. The dataset contains ~30 million sequence reads from 375 samples collected twice monthly between 2009 and 2016 at the SOMLIT-Astan station. Nicolas Henry from the Centre National de la Recherche Scientifique assembled the data using a pipeline documented on Zenodo.
Underwater video footage and still images collected from 122 stations on the Carnarvon Shelf, Australia, between 12 August and 15 September 2008. The survey was conducted by Geoscience Australia and the Australian Institute of Marine Science aboard the R.V. Solander. The objective was to collect co-located data to test physical parameters as surrogates for benthic biodiversity patterns.
Historic geospatial data digitizing the Hastings Local Plan 2004 Policies Map. The dataset is a snapshot of planning constraints from 2004, including national and international designations like Ancient Woodland and Sites of Special Scientific Interest. Hastings Borough Council created this dataset, which has been superseded by newer planning documents.
Polygon data representing planning constraints from the Hastings Local Plan Planning Strategy 2011-2028. The dataset is a digitised snapshot of the Policies Map as adopted in 2014, created by Hastings Borough Council. It includes constraints such as Protected Green and Open Spaces, Cycle Routes, and nationally/internationally designated sites.
A report detailing the methodology for creating seascape classifications for Australia's marine region. The process uses an unsupervised 'crisp' ISOClass classification in ERMapper, combining biophysical properties with consistent relationships to benthic biota. The Australian Ocean Data Network published this report, which was last updated on 2026-06-27.
Macquarie Harbour, Tasmania, hosts the only remaining population of the endangered Maugean skate. This project developed new monitoring methods using genetic sequencing and acoustic imaging, generating reference genomes and sequencing 162 individuals. The work was conducted in 2023-2024 by the NESP Marine and Coastal Hub.