Loading...
Loading...
DNA/RNA sequences, gene expression, protein structures, metagenomics, single-cell sequencing
23,811 datasets
Supplementary Table S3 lists ortholog sets for tRNAs and tRNA-like elements across mouse strains. The 4.1 MB XLSX file was authored by Andrew D. Holmes and last updated on May 14, 2026. It includes locus identifiers from the mm10 reference genome and other strains, with 'NA' indicating missing orthologs.
A supplementary table lists tRNA genes present as single-copy loci in over 15 mouse strain genomes and in rat, dog, human, and opossum genomes. The data includes corresponding Pol III scores. The dataset was authored by Andrew D. Holmes and last updated on May 14, 2026.
Supplementary Table S2 summarizes counts of high-scoring and low-scoring tRNA genes across multiple mouse strain genomes. The dataset includes corresponding high-confidence tRNA counts from the gtRNAdb database for comparison. It was authored by Andrew D. Holmes and last updated on May 14, 2026.
Supplementary Table S1 lists tRNA and tRNA-like sequences identified across all mouse strains. The table includes amino acid identity, anticodon, tRNA scores predicted by tRNAscan-SE, and copy numbers for each tRNA across mouse strains and the rn6 rat genome. It was authored by Andrew D. Holmes and last updated on 2026-05-14.
Two tables list transcription factors mapped to differentially expressed genes in bovine preantral follicles. Table S2A maps 12 TFs from the PF vs PMF comparison, while Table S2B maps 68 TFs from the SF vs PF comparison. The data was authored by Noemi Monferini and last updated on May 14, 2026.
Supplementary data from a study of a microsporidian symbiont isolated from Anopheles coluzzii mosquitoes in Burkina Faso. The dataset, authored by Roland Pevsner and last updated in May 2026, compares the Microsporidia sp. MB SOUVK7 assembly against other members of the phylum, including outgroups M. daphniae and Amphiamblys sp.
Supplementary Table 3 provides differential gene expression analysis for long-term estrogen-deprived (LTED) MCF7 breast cancer cells and two GLYATL1 knockout clones. The 4.8 MB XLSX file contains log2 fold changes and p-values for all identified ENSEMBL/HGNC genes, comparing each knockout clone to the LTED parent line. Janina Müller authored this dataset, which was last updated on April 30, 2026.
Supplementary Table 1 provides log2 fold changes and p-values for differentially expressed genes identified via DESeq2 analysis. Raw RNA-sequencing read counts compare MCF7 parental cells with long-term estrogen-deprived (LTED) cells, a model for endocrine resistance. Janina Müller authored this 2.5 MB Excel file, last updated on April 30, 2026.
Xiaoli Kong collected peripheral whole blood samples from acute ischemic stroke patients and healthy controls for transcriptome expression profiling analysis of mRNA, microRNA, and lncRNA. The dataset includes differentially expressed RNAs and constructs a ceRNA regulatory network, identifying key targets NFKBIA, TNFAIP6, ORM1, FN1, and MMP9. Molecular docking simulations suggest FN1 and MMP9 can bind to therapeutic drugs like Acetylsalicylic acid.
Xiaoli Kong collected peripheral whole blood samples from acute ischemic stroke (AIS) patients and healthy controls for transcriptome expression profiling analysis of mRNA, miRNA, and lncRNA. The dataset, last updated on 2026-04-09, contains an integrative multi-omics analysis revealing a drug-protein-ceRNA regulatory network in AIS. It includes differentially expressed RNAs, constructed ceRNA networks, and molecular docking simulations for predicted therapeutic targets.
A policy research document outlining a hybrid governance framework for synthetic biology and AI-driven bioengineering risks. The report is based on a Delphi process involving 13 experts from diverse sectors, including literature reviews, surveys, and workshops. It was authored by Dunja M. Sabra and last updated in April 2026.
Microbial DNA concentrations from DNA extraction and PCR analysis of core samples SSK105556 and SSK105560 collected from the UKGEOS Glasgow Observatory, borehole GGC01. The data indicates levels of microbial DNA below detection limits. The work was supported by NERC grant SHAPE-UK NE/R018006/1.
Figshare hosts a dataset of lysis recovery mutants isolated from ΔlysF1b phages Girr and NormanBulbieJr. The data, 5.5 KB in size, was contributed by author Richard S. Pollenz and last updated in April 2026. It documents genetic and phenotypic changes in phages infecting Mycobacterium smegmatis.
Sequences for DNA gBLOCKS and primers used to study lysis genes in two F1 cluster phages, Girr and NormanBulbieJr, infecting Mycobacterium smegmatis. Richard S. Pollenz authored this supplementary material for a 2026 study on holin-like proteins LysF1a and LysF1b. The dataset is a small 14.6 KB Excel file containing the specific constructs.
A transcriptomics study analyzed root tissue from four contrasting soybean genotypes under drought stress. The research identified 4,850 differentially expressed genes in tolerant genotypes and 6,272 in sensitive genotypes. The dataset was produced by researchers from Nanjing Agricultural University to investigate genetic mechanisms of drought tolerance.
Western China weakly cemented sandstones were tested for Cerchar abrasivity under dry, mud-saturated, and water-saturated states. The dataset contains network training parameter settings for an improved fuzzy stochastic RBF model that predicts abrasivity indices. It was authored by Yafeng Yao and last updated in April 2026.
A report from Geoscience Australia, last updated April 20, 2026, describes the iterative methodology for creating seascape classifications of Australia's marine region. The process uses unsupervised 'crisp' ISOClass classification in ERMapper, combining biophysical properties with consistent relationships to benthic biota. An initial validation of the classification technique was performed on a subset of data for the shelf surrounding Tasmania using an alternative 'fuzzy' classification.
Hejie Wang published this dataset on 2026-04-13. It contains results from a study exploring how metformin exacerbates diabetic amyotrophy in a streptozotocin-induced diabetic SD rat model. The 20.2 KB Excel file includes data from network toxicology, molecular docking, protein expression analysis (WB, ELISA, IHC), and 16S rDNA gene sequencing of fecal microbiota.
A marine survey report describes data collected from the Carnarvon Shelf, Western Australia, in August and September 2008. The survey was a collaboration between the Australian Institute of Marine Science and Geoscience Australia aboard the RV Solander. It collected physical and biological data across three primary study areas to test physical parameters as surrogates for benthic biodiversity.
Table 1_Loss of the plastidial signaling molecule, ppGpp, accumulation alters nuclear gene expression during nitrogen starvation.xlsx contains transcriptome analysis data from an Arabidopsis mutant study. The dataset, authored by Takanari Nemoto and last updated in April 2026, includes differential expression counts for thousands of nuclear-encoded genes under nitrogen-sufficient and nitrogen-deficient conditions.