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DNA/RNA sequences, gene expression, protein structures, metagenomics, single-cell sequencing
23,912 datasets
A supplementary file presents Bayesian latent class model estimates for the diagnostic sensitivity and specificity of nanopore metagenomic sequencing and qPCR tests. The analysis is based on 760 nasal swabs collected from calves and yearlings in 19 western Canadian feedlots for six bovine respiratory disease-associated viruses. The dataset was authored by Emmanuel Donbraye and last updated in March 2026.
Statistical estimates for the diagnostic performance of qPCR and nanopore metagenomic sequencing tests on nasal swabs from 19 western Canadian feedlots. The data, published by Emmanuel Donbraye, compares sensitivity and specificity for five viruses associated with bovine respiratory disease using Bayesian latent class modeling. The supplementary file was last updated on March 17, 2026.
Bayesian latent class modeling was used to estimate the diagnostic sensitivity and specificity of qPCR and nanopore metagenomic sequencing for five viruses associated with bovine respiratory disease. The dataset contains results from 760 nasal swabs collected from 19 western Canadian feedlots, comparing the two diagnostic methods. Emmanuel Donbraye published the data under a CC-BY-4.0 license, with the file last updated in March 2026.
From 2022 to 2024, a metagenomic study of sheep sera in Hami, East Xinjiang, China identified a novel copiparvovirus. The dataset includes findings on the Ovine copiparvovirus (OVPV), with a region-dependent prevalence of 10.4% (96/807) in Dahe Town. It was authored by Juanjuan Pan and published on figshare under a CC-BY-4.0 license.
A research paper presents an updated genomic characterization of immunoglobulin loci in the Ambystoma mexicanum (axolotl) species. The analysis is based on a novel 29.1 Gbp genome assembly (UKY_AmexF1_1) and includes manual curation and refinement using RNA-Seq data from multiple tissues. The work was authored by Stephanie Saint Remy-Hernández and last updated on March 17, 2026.
Stephanie Saint Remy-Hernández presents an updated genomic characterization of immunoglobulin loci in the axolotl (Ambystoma mexicanum) based on the UKY_AmexF1_1 genome assembly. The dataset, last updated in March 2026, compares immunoglobulin heavy (IGH) and lambda (IGL) loci between this new assembly and the previous AmbMex60DD version, noting structural variations. It is a 46.8 KB Excel file shared under a CC-BY-4.0 license on figshare.
Stephanie Saint Remy-Hernández published an updated genomic characterization of immunoglobulin loci in the Ambystoma mexicanum (axolotl) on March 17, 2026. The 124.6 KB dataset presents results from an alignment-based annotation and manual curation of a novel 29.1 Gbp genome assembly, refined with RNA-Seq data from multiple tissues. It maps the IGH locus to chromosome 13q and details structural variation in the lambda locus.
98 non-repeating clinical isolates of Acinetobacter baumannii were collected between 2013 and 2021 from a tertiary hospital in Guangzhou, China. Whole-genome sequencing identified ST2 as the dominant, high-risk multidrug-resistant clone, accounting for 66.3% of isolates and exhibiting a 95.38% carbapenem resistance rate. The dataset, authored by Xuxia Cui and last updated in March 2026, includes results for multi-locus sequence typing, resistance and virulence gene analysis, plasmid screening, and pan-genomic analysis.
Northern Grampians Shire Council created this dataset of capital works projects for the 2017-2018 period. The data likely contains geospatial polygons representing infrastructure assets or planned works within the shire. It is available in multiple geospatial formats including SHP and GeoJSON.
A 2007 protocol supplements the World Wine Trade Group Agreement, establishing common labeling requirements for wine. The document outlines rules for alcohol tolerance, vintage, grape variety, and wine regions to facilitate trade. It is an archived publication from Global Affairs Canada, referenced for research or recordkeeping.
AGSO Journal volume 16, issue 5 contains seven scientific articles published by the Australian Geological Survey Organisation. The articles cover geochemical analyses, zircon U-Pb dating, fossil wood identification, and biostratigraphic studies. This collection was aggregated by the Australian Ocean Data Network and last updated in April 2026.
Supplementary table S1 accompanies a manuscript evaluating a multiplexed tiling PCR scheme for whole-genome amplification of hepatitis B virus using Oxford Nanopore sequencing. The dataset is a 19.6 KB XLSX file uploaded to figshare by author Jon Bråte under a CC-BY-4.0 license. It was last updated on 2026-05-05.
Volume 9, Issue 2 of the BMR Journal of Australian Geology and Geophysics contains 11 research articles published by the Australian Ocean Data Network. The articles document fossil specimens and geological formations from locations including Canberra, New South Wales, Western Australia, Papua New Guinea, and Antarctica. The journal issue was last updated in April 2026.
Volume 9, Issue 2 of the BMR Journal of Australian Geology and Geophysics contains 11 research articles published by the Australian Ocean Data Network. The articles document fossil specimens and geological formations from locations including Canberra, New South Wales, Western Australia, Papua New Guinea, and Antarctica. The journal issue was last updated in April 2026.
Loaded with genome-wide identification of 45 AhSBP genes in Agave sisalana, with 18 identified as putative miR156 targets. It integrates comparative transcriptomics, promoter cis-element analysis, and RT-qPCR validation to elucidate the miR156-AhSBP module's role under pathogen stress. The analysis reveals lineage-specific expansion driven by segmental duplication (70%) and differential expression in susceptible versus resistant cultivars.
Filled with genome-wide identification of 45 AhSBP genes in Agave sisalana, with 18 identified as putative miR156 targets. It integrates comparative transcriptomics, promoter cis-element analysis, and RT-qPCR validation to elucidate the miR156-AhSBP regulatory module under pathogen stress. The study was conducted by Zhiwei Lu and published on figshare in 2026.
Results from a genome-wide identification of 45 AhSBP genes in Agave sisalana (sisal), with 18 identified as putative miR156 targets. It integrates comparative transcriptomics, promoter cis-element analysis, and RT-qPCR validation to elucidate the miR156-AhSBP module's role under pathogen stress from purple leaf roll and zebra stripe diseases. The study was authored by Zhiwei Lu and shared on figshare in March 2026.
Filled with genome-wide identification of 45 AhSBP genes in Agave sisalana, with 18 identified as putative miR156 targets. It integrates comparative transcriptomics, promoter cis-element analysis, and RT-qPCR validation to elucidate the miR156-AhSBP module's role under pathogen stress. The analysis reveals differential expression of genes like AhSBP9 and AhSBP38 between susceptible and resistant cultivars.
Containing results from a genome-wide identification of 45 AhSBP genes in Agave sisalana, with 18 identified as putative miR156 targets. It integrates comparative transcriptomics, promoter cis-element analysis, and RT-qPCR validation to elucidate the miR156-AhSBP regulatory module under pathogen stress from purple leaf roll and zebra stripe diseases. The analysis reveals differential expression patterns, such as the suppression of AhSBP9 and AhSBP38 in susceptible cultivars.
Results from a genome-wide identification of 45 AhSBP genes in sisal (Agave sisalana) and their expression analysis under pathogen stress. It includes data on gene expansion mechanisms, promoter cis-elements, and comparative transcriptomics for 18 putative miR156 target genes. The analysis is based on transcriptomic and RT-qPCR validation from susceptible and resistant cultivars.